| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3951 |
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| Symbol | |
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| ID | 5612816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4829202 |
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| End bp | 4829768 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934905 |
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| Product | Thiol-disulfide isomerase and thioredoxins-like protein |
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| Protein accession | YP_001475683 |
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| Protein GI | 157377083 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.337329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACGAC GTATTAAGAA GTTTATCAAA AACAGGCCAT TTATCGCTTC CGCAGCCTTT
TTGATGATGT CTCTGGGTCA CGCCAACCCC GCGGTGGCAT CAGCAAAGAA GATCAAACTC
TATGAGCCCA AGTCCCGGCA GGTGGCCCCG AAGCTGCATC TCAATGATCT TCAGGGGGAA
ACCTACTCTC TGAATAGTCA TGAGGGGGAG GTGCGTATCA TTAACTTTTG GTCGAGTTGG
TGTGGACCCT GTATCAAGGA GATGCCATCT TTATCCGGTC TGCACAAGGA GTTTAAGGGA
GATGGACTTC AGGTCGTGGC TGTTGCTGTA GGGGAGTCAT TGCATGATGT TAGAGCGTTT
AAGCAGACTT CAGGCATCAA CTTGCCCATG TTGGTCGATG AAGATAAAGC TGCCAGTGAT
GACTGGGGCG TATTTGCGGT CCCTATCAGC TACATCATAG ATCAGAAGGG ATATATCGCT
GCCAGAGTCG TGGGGGAATA CGACTGGGAA AGTGATGAAA TGAAGCAACT GCTGAACAAG
GTGAGCCAGG AACCCGGTAG TGGGTAG
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| Protein sequence | MRRRIKKFIK NRPFIASAAF LMMSLGHANP AVASAKKIKL YEPKSRQVAP KLHLNDLQGE
TYSLNSHEGE VRIINFWSSW CGPCIKEMPS LSGLHKEFKG DGLQVVAVAV GESLHDVRAF
KQTSGINLPM LVDEDKAASD DWGVFAVPIS YIIDQKGYIA ARVVGEYDWE SDEMKQLLNK
VSQEPGSG
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