| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3889 |
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| Symbol | |
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| ID | 5611185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4752707 |
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| End bp | 4753894 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934843 |
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| Product | phosphate-selective porin O and P |
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| Protein accession | YP_001475621 |
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| Protein GI | 157377021 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000019269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000370882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGATGA AAAAGACACT GATAGCAACC GCACTGGTTG GCCTTTTCGC CAGCCAAACT
GCATTTGCTT CTGAAGAGAC TCAAGAATTA CGTAAAGTGA TCGAGCAGCA GCAAAAGGTG
CTACAAGATC TGGAACGTCG TCTCGAAGCC ACTGAAACTC GTGTTGAGAA GACAGCCGAT
GTCGTAGAAG AGGTTGCTGA GTCTAAGAGT GCAACAACTA TCGGTGGTTA TGGTGAACTT
CACTACAACA ACATTACCGA TAACAAGTCT GGCAGCGATA AAAAATCAAT CGATTTCCAC
CGTTTCGTAT TGTTCTTCGG CCATGAGTTC AGTGAAAAAA CACGTTTCTT CTCTGAAGTT
GAGCTTGAAC ACTCACTTTC CGGTGATGGT AAGCCAGGTG AAGTAGAGCT TGAGCAAGCC
TATATTGAGC ATGACTTCAG CGAGATGTTT ACCGGTAAAG CGGGTCTGTT CCTGATGCCT
GTCGGTATCA TCAACGAAAC ACACGAGCCA CCAGCATTCT ATGGCGTCGA GCGTAACCCG
GTTGAGAAAA ACATTCTTCC GGCAACTTGG TGGGAAGCCG GTGCAGCACT TAATGTAAAG
GCCGCTCCAG GTCTGGCATT CGATGGTGCA GTAACCAGTG GTCTTGAAGT TGCTACTGAA
GGCAGTAAAG CCTACAACAT CCGTAGCGGT CGCCAGAAAG TAGCTAAGGC AAATGCTTCA
GATCTTGCTT ACACGGCGCG CGCTAAATAC ACAGGCGTTC CAGGTTTAGA GCTTGCTGCA
ACCGCTCAAT ACCAAGCAGA TATCACTCAG AGTGCAGGTG GCGTAGACAC AGCCTCTGCA
ACTCTTTTGA CTGCTCACGC TATCTACAGC ATCCAGGGTT TCACAGTTAA AGCCCTTTAT
GCTCAATGGG ATATCGATGG TAACGAAGCA GAAGCCTTAG GTCGTGATGA GCAAAACGGT
TGGTACATCG AGCCTTCATA CCGCTTCAAC GAAAGCTTCG GTCTGTTTGC TCGCTACAAC
GAATACGACA ACGAAGCTGG TAACAGCGAA GACACTAAAA TTGAGCAAAC CAACGTAGGT
ATTAACTACT GGTTGCATGA GAACGTGGTA TTCAAGGCTG ACTACGAAAA AGTTGGCGGC
GCTAAAGATT CAGACGGTTT CAACCTGGGT GTAGGTTACC AGTTCTAA
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| Protein sequence | MMMKKTLIAT ALVGLFASQT AFASEETQEL RKVIEQQQKV LQDLERRLEA TETRVEKTAD
VVEEVAESKS ATTIGGYGEL HYNNITDNKS GSDKKSIDFH RFVLFFGHEF SEKTRFFSEV
ELEHSLSGDG KPGEVELEQA YIEHDFSEMF TGKAGLFLMP VGIINETHEP PAFYGVERNP
VEKNILPATW WEAGAALNVK AAPGLAFDGA VTSGLEVATE GSKAYNIRSG RQKVAKANAS
DLAYTARAKY TGVPGLELAA TAQYQADITQ SAGGVDTASA TLLTAHAIYS IQGFTVKALY
AQWDIDGNEA EALGRDEQNG WYIEPSYRFN ESFGLFARYN EYDNEAGNSE DTKIEQTNVG
INYWLHENVV FKADYEKVGG AKDSDGFNLG VGYQF
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