| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3807 |
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| Symbol | |
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| ID | 5610741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4639501 |
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| End bp | 4641276 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934761 |
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| Product | sulfite reductase (NADPH) flavoprotein, alpha chain |
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| Protein accession | YP_001475539 |
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| Protein GI | 157376939 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
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| TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0251884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTAA AAGAGCTTTC ATCACTCGCT TCTCCTCTGT CGCAAGGACA GGTCGATAAG
TTAAAGCAGC TCACTTCTGA GCTGAGTGCC ATTCAACTCG CTTGGGTGGG AGGATACCTG
TCTGCGTCTG CCGGACAAGC AAGCATCAAT GTTGCGGATA CGCAACCTGC TCAAACGATC
ACTATTTTAT ATGGTAGCCA AACCGGAAAC GGTCGAGGTG TTGCCACCGA GCTGGCAGCG
AAGGCTCGAG CTCAAGGCTA TGCGGTCAAC TTAGCTTCCA TGTCGGATTA CAAGGTAAGA
CAGTTGAAGC AGGAGACGCT GTTATTGGCA GTGGTGAGTA CCCATGGTGA AGGTGAAGCA
CCGGATGATG CTATTGAGTT GCATAAGTTT CTGGCATCGA AACGTGCTCC TAAGCTGGAA
AACTTAAACT ACTCTGTGTT GGCTCTGGGA GATTCAAGCT ACGAATTCTT CTGCCAGACA
GGTAAAGACT TCGATGAGAG ATTATCAAAG CTAGGTGCAA CTTCGATTCA ACCTCTGGTT
GAGTGTGATG TGGACTATGA GTCTGCGGCA GAGCAGTGGC AGGAGAGTGT ACTGGAAGCG
GTTAAGCCGT TAATCCAGAC CTCTGGTGCG AGTGTGGTTT CTATCGCCCC TTCAGTGGCA
GAAAGTGCAT ACACCAAGCA AAAACCTTAT ACCGCAGAGG TCTTAGTTAG CCAAAAGCTA
ACGGGCCGGG ACTCGGACCG TGATGTGCGC CATGTCGAAA TTGATCTGGA TGGATCGGGC
CTAAGCTACC AAGTCGGTGA TGCGCTAGGC GTCTGGTTTA CCAATGCCGA TACTTTAGTC
GATGAAGTTT TGATTAAACT GGCACTCGAT GGTGACTCAC CGGTGACCGT CGGCAAGGAC
TCCCTGTCGC TCAAGCAAGC CTTGATTGAG AAGAAAGAGC TGACTCAGAT CTATCCGGGT
CTGGTTCAGG GATGGGCCTC ATTGAGTGGA AATGAGGAGT TGCTTAATAT CGTTGAAGAC
AAAGAGTTAA CCCGTCACTT CGTGCTTAAT AACCAACTGG CCGATCTCGT CGCTAACTAT
GCGGTGCAGA TCACTGCGAC TCAACTGCTT GAGCTACTTC GCCCAATCAC ACCGCGCCTC
TACTCTATCG CATCGAGTCA GGCCGAAGTT GAGTCTGAAG TTCATCTGAC CGTTGCCCTG
GTTGAAGATG AACATGAGGG GACGGCCCGT TTCGGTGGTG CGTCTCAATT CCTGGCCCAG
GCCGAGGAGG GCACGACGGT TAAGGTTTAT GTCGAGCCTA ATAACCATTT CAGATTGCCA
GAAAACCCGG AAACGCCAGT GATCATGGTG GGGCCGGGAA CCGGTGTAGC CCCATTCAGG
GCCTTTATGC AGGAGAGAGC TTCACAGGGT ATCGAGGGCA ACAGCTGGCT GATTTTTGGT
AACCCACATT TCGAACAAGA CTTCCTCTAT CAAACCGAGT GGCAGCAATA TCTTAAAGAT
GGATCGCTTA CCCGTCTCGA TTTGGCGTTC TCCAGAGATC AAGCGCATAA AGTCTACGTC
CAGCATCGTA TTGCCGAGCA GGGCAAAGAG TTATGGCAGT GGCTGGAGTC AGGCGCTCAC
CTCTACATCT GTGGCGACGG CGAGCGTATG GCGAAAGATG TCCATCAGGC ATTACTGGAT
GTGGCGGTTA AGTTCGGCGC TAAGACGCCT GATGAAGCAG AAGCCTATTT CGAAGCCCTG
CGCAGCGATA AACGCTACCA AAAAGATGTC TATTGA
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| Protein sequence | MLLKELSSLA SPLSQGQVDK LKQLTSELSA IQLAWVGGYL SASAGQASIN VADTQPAQTI
TILYGSQTGN GRGVATELAA KARAQGYAVN LASMSDYKVR QLKQETLLLA VVSTHGEGEA
PDDAIELHKF LASKRAPKLE NLNYSVLALG DSSYEFFCQT GKDFDERLSK LGATSIQPLV
ECDVDYESAA EQWQESVLEA VKPLIQTSGA SVVSIAPSVA ESAYTKQKPY TAEVLVSQKL
TGRDSDRDVR HVEIDLDGSG LSYQVGDALG VWFTNADTLV DEVLIKLALD GDSPVTVGKD
SLSLKQALIE KKELTQIYPG LVQGWASLSG NEELLNIVED KELTRHFVLN NQLADLVANY
AVQITATQLL ELLRPITPRL YSIASSQAEV ESEVHLTVAL VEDEHEGTAR FGGASQFLAQ
AEEGTTVKVY VEPNNHFRLP ENPETPVIMV GPGTGVAPFR AFMQERASQG IEGNSWLIFG
NPHFEQDFLY QTEWQQYLKD GSLTRLDLAF SRDQAHKVYV QHRIAEQGKE LWQWLESGAH
LYICGDGERM AKDVHQALLD VAVKFGAKTP DEAEAYFEAL RSDKRYQKDV Y
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