| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3806 |
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| Symbol | |
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| ID | 5610740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4637670 |
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| End bp | 4639433 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934760 |
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| Product | sulfite reductase subunit beta |
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| Protein accession | YP_001475538 |
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| Protein GI | 157376938 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0763742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGTC CCGAGATTGG GCGTTACACC TGGATAATGA ATGAGACTGT TGCCATGACT
GTAGAAAATG TTGAAGAGAA ATTATCGATA AATGAACACC TGAAAACCGA CAGTGACTTC
CTCAGAGGAG GTATTGAAGA GGGGCTCGAT ACGGCAGTTA CCGGCGCATT TAGCGAGGGC
GATCAGCAGT TAATCAAGTT TCATGGTTTT TACCAGCAAG ATGACCGGGA TCTACGTAAT
GAACGTAAGG AGCAGAAGTT AGAGCCTCTC TATAGCTTTA TGTTGCGTGC CCGTGTTGCC
GGTGGTGTGT GTACACCCGA GCAGTGGTTA GGTGTCGATG AGATATCATC GACATTGACC
AGTTCAAACA GTATTAGACT CACGACGCGT CAGACATTTC AATATCATGG AATCTCGAAG
CGTAACCTCA GAACCTTGAT TCAGAGCCTG GACAAGAAGG CGTTAGACTC TATTGCGGCG
TGTGGTGATG TAAACAGAAA CGTGATGTGT AATCCAAATC CTGTCGAGTC TCGTCTGCAT
GAACAGGCGT ATTACTGGGC TAAAAAGCTG TCAGATATTT ATCTTCCGAG AACTAAGGCC
TATGCCGAGA TCTGGTTAGG TGATGACAAA GTTGCCACCA GTGAGGGCGA TGAGGTTGAG
CCTATATACG GTAAAACCTA TCTGCCGCGT AAGTTTAAGA TGGCCGTTGC CGTGCCACCG
GATAACGATG TCGACGTTTA CACTAATGAC TTAGGCCTGA TCGCGGTTGC ACAAGAGGGT
GAGCTTGTCG GTTTTAACCT GGTCGCCGGT GGTGGTATGG GCTCAACCCA TGGTGAAGTC
GAGACCTTCC CGCGTCTTGC CGATGACTTT GGTTTTATCA AGGCCGAAGA CACCCTGAAA
TTTGCCGAAG CCATCTTGAA AGTTCAACGC GACTGGGGTA ACCGCTCTAA CCGTAAGCAG
TCACGACTTA AGTACACTAT CGTCAAGCAT GGCTATGACG CCTTCAAGGC CGAAGTTGAA
AAGCGCGCCG GCGTTACGTT CGAGCCTAAA CGCGACGTGG TGATTGGCGA TCGCGGCGAT
CGTTATGGAT GGATCAAGGG TGTCGATAAC AGATGGCACC TGACTCTCTT CATCGAAGGG
GGGAGAATCA AAGATCTACC GGGTCAGCCA CTACAAACCG GGCTGAGAGA GATAGCTAAA
ATCCATAAAG GTGATTTTAG GATGACCTCA AATCAAAACT TTATCGTTGC CGGTGTTGCC
GAGGAAGATA AAGAGGCGAT TGAGGCCCTG GCCCGCAATC ACGGTTTGAT GGGTAAGCTT
ATTACCGAAA CCCGTGGCCG CTCTATCGCC TGTGTGGCTT TGCCAACCTG TGCACTGGCG
ATGGCCGAGG CGGAGCGCTA CTTCCCCGAT TTTCTGACTA AGGTTGAGTC CTTGCAGGAG
AAGCATGGTT TTGCCGATCA GGGCATAGTG ATCCGTATGA CGGGTTGCCC TAATGGATGT
GCAAGACCCT TCGCAGCCGA AATAGGCCTG GTGGGTAAAG CGCCGGGCCG CTACAACCTC
TATCTTGGGG CGAGCTTTGA AGGGACTCGG CTGAACAAGC TCTATCGTGA GAATATTCAG
GAAGCCGAGA TATTATCTGA ACTCGACCAA CTGTTTGCCC GCTATGTGAG TGAGCGTGAA
GAGGGCGAAA CCTTTGGTAA TTTCACGGTT CGCTCAGGCG TAGTGAAAGC GGTTATCGAT
GCCGCTAAGG ACTTCCATGA CTAA
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| Protein sequence | MWRPEIGRYT WIMNETVAMT VENVEEKLSI NEHLKTDSDF LRGGIEEGLD TAVTGAFSEG
DQQLIKFHGF YQQDDRDLRN ERKEQKLEPL YSFMLRARVA GGVCTPEQWL GVDEISSTLT
SSNSIRLTTR QTFQYHGISK RNLRTLIQSL DKKALDSIAA CGDVNRNVMC NPNPVESRLH
EQAYYWAKKL SDIYLPRTKA YAEIWLGDDK VATSEGDEVE PIYGKTYLPR KFKMAVAVPP
DNDVDVYTND LGLIAVAQEG ELVGFNLVAG GGMGSTHGEV ETFPRLADDF GFIKAEDTLK
FAEAILKVQR DWGNRSNRKQ SRLKYTIVKH GYDAFKAEVE KRAGVTFEPK RDVVIGDRGD
RYGWIKGVDN RWHLTLFIEG GRIKDLPGQP LQTGLREIAK IHKGDFRMTS NQNFIVAGVA
EEDKEAIEAL ARNHGLMGKL ITETRGRSIA CVALPTCALA MAEAERYFPD FLTKVESLQE
KHGFADQGIV IRMTGCPNGC ARPFAAEIGL VGKAPGRYNL YLGASFEGTR LNKLYRENIQ
EAEILSELDQ LFARYVSERE EGETFGNFTV RSGVVKAVID AAKDFHD
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