| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3733 |
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| Symbol | |
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| ID | 5614184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4540548 |
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| End bp | 4541321 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934687 |
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| Product | cobalamin 5'-phosphate synthase |
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| Protein accession | YP_001475465 |
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| Protein GI | 157376865 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.65083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGTC GAGAACTGAC ACTGTTTTTT ATTGCGATGG GCTTCTTTAC CCGTATCCCA
ATGCCTGCCT GGGTGACGGT GGACAGCGAC AACCTGAACA GAGCCAATCG CTATTTCGGA
CTGGTCGGCA TCTTGGTGGG GGGGCTCAGT GCCGCGGTCT ATGCTCTGGC CGTTAACTGG
TTGCCGGCGT CGGTAGCCAT TATATTTGCG ATGATCACCA GTGCCATCGT GACCGGTGGT
TTTCATGAAG ATGGCTTGGC CGATACCGCC GATGGTTTCG GCGGTGGCTG GACCGTAGCC
GATAAACTAT TAATCATGAA AGACTCCCGT CTCGGTAGCT ATGGCGCGTT GGCCCTGGTA
TTTATTCTGC TGCTGAAGTG GCAAATATTA ACTGAAGTGG CTGTTATCGA TACCAATATG
GTGAGCGTCA TCTTGATAGT GGGTCACTGT TTGAGTCGTG TTTTTGCTGC CAGCTTTATC
TTCACCGAAC AATATGTCAG TGACTCTGAT ACCAGTAAGA GTAAGCCTTT AGCCCAGAAC
CAGAGTGTCA ATGAGCTGGT TATCTCGCTT GGGACAGCGT TGATTATTTT ACTATTGCTA
AGCCTGAGTC AGGCTCTGAT CCTTATTGGA TCACTCCTGT TGCTGAGGTG GGGATTGGTG
GTGGCCTTTC GCCGTCAAAT AGGTGGCTAT ACCGGCGATA CGCTGGGGGC CGGGCAGCAG
ATATCTGAAA TGCTCTGCTA CCTTATTATT CTTATCTTGG TGAGCTCCCT ATGA
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| Protein sequence | MFRRELTLFF IAMGFFTRIP MPAWVTVDSD NLNRANRYFG LVGILVGGLS AAVYALAVNW
LPASVAIIFA MITSAIVTGG FHEDGLADTA DGFGGGWTVA DKLLIMKDSR LGSYGALALV
FILLLKWQIL TEVAVIDTNM VSVILIVGHC LSRVFAASFI FTEQYVSDSD TSKSKPLAQN
QSVNELVISL GTALIILLLL SLSQALILIG SLLLLRWGLV VAFRRQIGGY TGDTLGAGQQ
ISEMLCYLII LILVSSL
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