| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3714 |
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| Symbol | |
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| ID | 5613829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4519829 |
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| End bp | 4520260 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934667 |
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| Product | universal stress protein |
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| Protein accession | YP_001475446 |
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| Protein GI | 157376846 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.782463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACTC GTCAAATTTT GTGTCCTACA GACTTTTCCG ATACGGCATC TCACGCACTT
CGTTATGCGA TTGAGATGGC AAATTTTTAT CATGTCGGTT TTCGCCTGCT GCATGTGATA
GATCAGCCTT ATGGTGATGC GAACTTCCAA ATTTTAGCCA TTACTCCGGA AGAGTTGGCT
CAGAATATGG AAGAGGACGC AGCCGAGAAG ATGAAACAGC TACTTTCGGG CCTTAAGAGT
GAACTCTCTA TCGAAACCGT GATTAGGCGC GGTTTGCCCG TGGAGCAGAT CCTCGAAGAG
GCAGAAGAAA ACGATGTTGG AATGATAGTG ATGGCCTGCC ATGGCCGCAC CGGTATATCT
CACTTTCTGC ATACTAATGT TGCCGAAGGC GTGGCCAATG GTGCTAAGTG TCCTGTGTTG
GTGGTGAAAT AA
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| Protein sequence | MRTRQILCPT DFSDTASHAL RYAIEMANFY HVGFRLLHVI DQPYGDANFQ ILAITPEELA
QNMEEDAAEK MKQLLSGLKS ELSIETVIRR GLPVEQILEE AEENDVGMIV MACHGRTGIS
HFLHTNVAEG VANGAKCPVL VVK
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