| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3695 |
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| Symbol | |
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| ID | 5614086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4498134 |
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| End bp | 4499738 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934648 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001475427 |
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| Protein GI | 157376827 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATG ATTCAGATGT GAAACTTGAC CTCACAAAAT ACACCTCTCT TATCGACCTG
ATTGAGCAGG CCGCCACCCG TTACGGTGAC AAGACTGCCT ATGCCTGCCT TGGGCATCAC
ACCTCTTTTT CTGAAATTGA GCGCGACTCA CGCTATTTTG CCGCTTATCT GCAAAATCAT
ACCGCTTTGG AAGTGGGCGA TCGCGTCGCA ATACAACTGC CAAATATTAC TCAGTTCGTT
ATCGCCGCCT ATGGTGCCAT CAGGGCCGGC ATGGTGCTGG TTAACACCAA CCCCTTGTAC
ACCGAACGTG AGCTGACCCA TCAGTTTAAT GATTCCGGGG CTAAGGTTGT GGTTATCCTA
TCCGACCTGC TACCGACTCT CACCAATGTT GTCGCCAATA CCGGCATCGA AACCGTCATA
TCCACCCATG CCTTAGACCT GATATCCCCG CAGGCGCAAC CCGAGGTCCC CTTTGATACC
ACCTTGTTTA ATGACGTATT GGCAAAGGGA GAGCAATCAC CATTTAACCG GATCACAAGC
CAAATAGATA AACTGGCAGC GCTGCAGTAC ACAGGAGGCA CGACCGGGTT ATCTAAGGGA
GCCATGCTGA GCCACAGCAA CTTAATCGCT AACGCGATGC AGATTAAATC TCGTTTAGGG
GAGAAGCTTG TAGAGGGCGA AGAGATATTT GTCGCGCCGC TTCCCGTCTA CCATATCTAC
GCCTTCATGG TGAATCTGGT GCTCTATTTC GAGCGTGGCT GCTGCTCGGT ATTGATCCCC
AACCCGAGAG ATATCTCATC ACTAATCGCT ACCCTCTCTA AATATCCATT TACCGGCTTT
GCAGGTCTCA ACACCCTCTT CGTCGGTCTC TGCCATCAAC CTGAATTTAA GGCGTTAGAC
TTCAGTCATC TGAAAATTAC CATCTCCGGC GGGACCGCCC TGACACAGGC CGCAGCCAAT
GTCTGGCAAC AAACCACGGG ATGCACCATC TCCGAAGGCT ACGGCTTATC TGAAACATCA
CCCGTCGTCT CACTCAATGC TCCCGGACAT GAACAGCTGG GCACCATCGG TAAGCCGGTG
CTGGAAACTG AGGTAAAGAT CCTCGATAAC GATGCCAACG AAGTGCCATT GGGTGAACGT
GGTGAGCTGG CAGTGAGAGG CCCTCAGGTG ATGGGCGGCT ATTGGAACAA TACGGGCGAC
ACCGCAAATG TGATGACCAA AGATGGCTTC TTTAAAACCG GCGATATCGC CATAGAGACG
GCAGACGGTT TTCATAAGAT CGTCGACCGT AAGAAAGACA TGATCATTGT TTCCGGTTTT
AACGTCTACC CTAACGAGGT GGAGGAGGTT CTGGCCAGCC ACGACGCCGT ACTCGAATGT
GCCGTTGTTG GCATAGACAA CGAACGCAGT GGTGAAGCGG TGAAGGCCGT CATCGTACTC
GCCAATAATG AGGCGGACAC CATCGAGGTG GAGTCAACCA TCTTGGCCTA CTGCCGTGAA
CAGTTAACCG CTTATAAGAT CCCTAAGATA GTCGAGTTTG TACCTATGCT GCCAAAATCT
ACCGTAGGTA AGATCCTGCG AAGAGAGTTG AGGAAAGGCG TGTAG
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| Protein sequence | MAYDSDVKLD LTKYTSLIDL IEQAATRYGD KTAYACLGHH TSFSEIERDS RYFAAYLQNH
TALEVGDRVA IQLPNITQFV IAAYGAIRAG MVLVNTNPLY TERELTHQFN DSGAKVVVIL
SDLLPTLTNV VANTGIETVI STHALDLISP QAQPEVPFDT TLFNDVLAKG EQSPFNRITS
QIDKLAALQY TGGTTGLSKG AMLSHSNLIA NAMQIKSRLG EKLVEGEEIF VAPLPVYHIY
AFMVNLVLYF ERGCCSVLIP NPRDISSLIA TLSKYPFTGF AGLNTLFVGL CHQPEFKALD
FSHLKITISG GTALTQAAAN VWQQTTGCTI SEGYGLSETS PVVSLNAPGH EQLGTIGKPV
LETEVKILDN DANEVPLGER GELAVRGPQV MGGYWNNTGD TANVMTKDGF FKTGDIAIET
ADGFHKIVDR KKDMIIVSGF NVYPNEVEEV LASHDAVLEC AVVGIDNERS GEAVKAVIVL
ANNEADTIEV ESTILAYCRE QLTAYKIPKI VEFVPMLPKS TVGKILRREL RKGV
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