Gene Ssed_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3679 
Symbol 
ID5613490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4485166 
End bp4485474 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content43% 
IMG OID640934632 
Producthypothetical protein 
Protein accessionYP_001475411 
Protein GI157376811 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC ACGCTATTGA AATTAGCTTA TTAGGCCGTA CATACTCCAT CGCTTGCCCA 
CCAGGACAAG AGGGTGCATT GCAGCACGTG GCACAAAACC TCGAACAACA GTTGAGTTCA
TTGAAAACCC GAACCAACAA TTTGAGTCGC GAAGAAATTG CCATTATGGC AGCCTTGAAT
ATCGGTTATG AGTTGTTGGA AGAACAGCAA AAGAATCAAG ATTATATTAA GCAGATGGAT
GATAAGATCG GTTTGCTTCA GTCGACTTTA GAGAACGCAC TCGTTGAGCG TTCGACAAAA
GACGATTAA
 
Protein sequence
MSSHAIEISL LGRTYSIACP PGQEGALQHV AQNLEQQLSS LKTRTNNLSR EEIAIMAALN 
IGYELLEEQQ KNQDYIKQMD DKIGLLQSTL ENALVERSTK DD