| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3670 |
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| Symbol | |
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| ID | 5613650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4472036 |
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| End bp | 4472722 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640934623 |
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| Product | transposase and inactivated derivatives |
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| Protein accession | YP_001475402 |
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| Protein GI | 157376802 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1943] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGAG CACATAGGAA CAGCCCAGTA AATATTCCTC AACATATCAT TCAACGAGGG
AATAACCGTC AAGCCTGCTT TGCCTCAGAA GAGGATTTTA TGCTTTATGC CAAATGGCTA
AAGCAATATG CATCTGAGTA TCAAGTTCAT ATTCATGCTT GGGTATTTAT GACTAATCAT
GTCCATATTC TGTGTACCCC ATTACAACCA AATGCGATTA GCCAGATGAT GCAATCATTA
GGTAGGCAGT ACGTTCGCTA CTTCAACTTT ACTTACAAGC GAACAGGCAC ATTATGGGAG
GGAAGATTCA AGTCTTGCCT TGTACAAACT GAACAGTACT TACTTCAAGT CTATCGCTAT
ATTGAGCTCA ACCCAGTAAG AGCTGAGATG GTCGCAGAAC CTTCTGCCTA TAAGTGGTCA
AGTTATCAAA TTAATGCACT CGGAAAAACC TCAACCCTAT GCACGCCCCA TCAAACCTAT
CTGTCACTCG CGAGTAACCC CACTCAAAGG CAGATAAACT ACAGGGCACT ATTCAAACAC
CATATAGATA CTCAACTCAT AACCCAAATA CGCAACGCCA CCAACAAAGG CATGGCTATC
GGAAATGATA AGTTTAAAAA TGAGATTGAA GCACTAACAG GGGAGTCAAT TCGACCGAAG
AAACGAGGAA GACCAAGCCA GAAATAG
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| Protein sequence | MPRAHRNSPV NIPQHIIQRG NNRQACFASE EDFMLYAKWL KQYASEYQVH IHAWVFMTNH
VHILCTPLQP NAISQMMQSL GRQYVRYFNF TYKRTGTLWE GRFKSCLVQT EQYLLQVYRY
IELNPVRAEM VAEPSAYKWS SYQINALGKT STLCTPHQTY LSLASNPTQR QINYRALFKH
HIDTQLITQI RNATNKGMAI GNDKFKNEIE ALTGESIRPK KRGRPSQK
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