| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3582 |
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| Symbol | |
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| ID | 5614009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4364406 |
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| End bp | 4365767 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934535 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit A |
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| Protein accession | YP_001475314 |
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| Protein GI | 157376714 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
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| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTT TCTCAGACCA GATTAGAATA GTAAAAAAGG GCTTAGATGT GCCCATTGCC
GGGGAACCTC GGCAAGAATT CGATAACGCC GCTAGGCCAT CGCATGTGGC CCTTCTCGGT
GAAGAATATG TCGGATTAAA GCCCACCATG ATGGTGGAAG TCGGTGATAT GGTCAAAAAA
GGCCAGCCAC TTTTTGAAGA CAAGAAGACA CCGGGTGTAC TCTTTACCGC GCCAGCAAGT
GGTGAAGTGA CCGCTATCAA TCGTGGTGAA CGCCGCGTAT TGCAATCTGT GGTCATCACT
TGCCAGGGCG ACGAGCAAGA GGCGTTTGAG ACTAGCTCTG ACGTATCGTC GATGAGTCGT
CAGTCAGTAC AGGATAACTT GGTTAAGAGT GGTCTTTGGA CTGCACTTCG TACCCGTCCT
TTCTCCCGCG TGCCTCAACT CGACAGCACT GCAGCCGGTA TTTTCGTGAC TGCGATGGAT
ACCAATCCTC TCTCTGCCGA ACCTCGTCTG GTTATTGCCG AAAATGAACA GGCATTTGCA
GTGGGTATGT CGGCTCTGAC TCGTCTGACC GATGGCAAAG TGTATCTTTG TCACGACGAA
GGTGAATCAC TGCCTGGCCA TGAGCTATCA CAGGTTGAGA CTCATCGCTT CGGTGGTGTC
CATCCCGCCG GGTTAGTAGG TACACACATT CACTTTATTT TACCTGTCAG CGTCGAGCGC
CCAGTCTGGC ATATCGGCTA TCAGGATGTT ATCGCCTACG GCAAGTTGTT CCTTACCGGC
GAACTCTATA CCGATCGTGT CGTGGCGCTT GCTGGTCCCA ATGTGGTCAA CCCTCGTCTT
ATCCGCACCC AACTGGGCGC CGAGTTAAGC GCGATAGTTA AAGATGAACT GAAACCTGGC
TTCTCTCGCG TGGTTTCGGG CTCGGTACTG TCCGGGCATA CCGCTACCGG CGTTTACGAT
TACCTGGGCC GATTCCATGG TCAAGTCACC GCCTTAACTG AAGACTCTGA GCACCATCTG
CTGTCTTGGG TTCGTGGGGG CTCTGAAAAG TTCTCTATCA CTCGCGCAAT GACTTCACGC
TTTAAGCCCG CTAAGAAGTT GTTTGAGATG ACGACTCACA CTGGCGGCGC TGCCCGCGCC
ATGATGGCGT TTGGTCAGTT AGACCGCGTC ATGCCATTAG ATATTTTACC TACACTTTTG
GTTCGCGACC TTGTAGTTCG TGATACCGAT GAGGCTCAGG CGCTGGGCGC TTTAGAGTTG
GACGAGGAGG ATTTGGCCCT GTGCACCTTC GTTTGTCCCG GTAAATATGA TTTCGGCAAA
GAGCTGCGTG CCTGCTTAGA TATTATTGAA AGAGAAGGTT AA
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| Protein sequence | MAGFSDQIRI VKKGLDVPIA GEPRQEFDNA ARPSHVALLG EEYVGLKPTM MVEVGDMVKK
GQPLFEDKKT PGVLFTAPAS GEVTAINRGE RRVLQSVVIT CQGDEQEAFE TSSDVSSMSR
QSVQDNLVKS GLWTALRTRP FSRVPQLDST AAGIFVTAMD TNPLSAEPRL VIAENEQAFA
VGMSALTRLT DGKVYLCHDE GESLPGHELS QVETHRFGGV HPAGLVGTHI HFILPVSVER
PVWHIGYQDV IAYGKLFLTG ELYTDRVVAL AGPNVVNPRL IRTQLGAELS AIVKDELKPG
FSRVVSGSVL SGHTATGVYD YLGRFHGQVT ALTEDSEHHL LSWVRGGSEK FSITRAMTSR
FKPAKKLFEM TTHTGGAARA MMAFGQLDRV MPLDILPTLL VRDLVVRDTD EAQALGALEL
DEEDLALCTF VCPGKYDFGK ELRACLDIIE REG
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