| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3539 |
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| Symbol | |
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| ID | 5611984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4312040 |
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| End bp | 4313236 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934492 |
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| Product | acetate kinase |
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| Protein accession | YP_001475271 |
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| Protein GI | 157376671 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0282] Acetate kinase |
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| TIGRFAM ID | [TIGR00016] acetate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACA AACTCGTACT CGTTCTCAAT TGTGGTAGCT CTTCACTAAA ATTTGCAGTC
ATCGATGCGC TAACCGGCGA TGAGCAGCTC TCAGGGCTTG CCGAATGCTT TGGGTTAGAA
AACGCCTGTA TTAAATGGAA TGTAAACGGA GAAAAGCATG AGGCCGATCT AGGTGTATTT
ACCGCACACC GTGAAGCTGT TGAATATATC GTTAATATCA TCTTATCTGA TCTCCCACAT
CTTAAAGAAC AGATATTGGC CATTGGACAC AGGGTCGTTC ACGGTGGAGA GAAATTTACT
CAATCCGTAC TAATCGATGA AACCGTAGTC CAGGGCATAG AGAATTGCGC CAGCTTGGCA
CCGTTACATA ACCCTGCACA CCTGATTGGA ATTCGCTCGG CTCAGGCTTC ATTTCCGTCC
CTTCCACAGG TCGCCGTATT TGATACCGCT TTCCATCAAA CAATGCCAGA AAAAGCCTAC
ATCTATGCCA TTCCCTATAA GCTGTATCGT GAAAATAGTA TTCGCCGTTA TGGCATGCAC
GGTACCAGCC ACCTGTTTGT CAGCCGTGAA GCTGCGAAGC TTCTTGGTAA ACCACTCGAA
GAGACCAATA TTGTTAGTGC CCACCTTGGA AACGGCGCGT CGATAACCGC GATCAGAGGT
GGTAAGAGCG TAGACACCTC GATGGGGCTA ACACCGTTAG AAGGCTTAGC GATGGGAACC
CGCTGCGGCG ATCTCGACCC ATCAATTATC TACCATCTGA TTAATCGACT CGGCTACACC
TTAGATGAAG TCAATCACCT GCTAAACAAC CAAAGCGGCT TACTTGGGAT CTCTGAACTA
ACCAATGACT GCCGTGGCAT AGAAGAGGCT GTCCAGCGTG GGCATAAAGG AGCGAGTTTA
GCGCTGGATA TATTCTGTTA TCGCCTGGCT AAGTATATCG CCTCATATAC CGTCCCTTTA
GGTCGATTAG ATGCCTTAGT GTTCACCGGT GGAATAGGCG AAAACTCCTC TCTCGTCAGA
GAAAAAACCC TCAATTTACT GGAGGTATTC AAATTTGAAC TCGATAACGA ACGTAACCAG
GCAGCACGCT TTGGCAATCG AGGGAAGATA ACGAAAGACA GTGGCCCTGT CGCCTTAGTT
ATTCCGACCA ATGAGGAGTG GGTTATCGCC CAAGATGCAA TGGCACTGAT TAAATAA
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| Protein sequence | MSNKLVLVLN CGSSSLKFAV IDALTGDEQL SGLAECFGLE NACIKWNVNG EKHEADLGVF
TAHREAVEYI VNIILSDLPH LKEQILAIGH RVVHGGEKFT QSVLIDETVV QGIENCASLA
PLHNPAHLIG IRSAQASFPS LPQVAVFDTA FHQTMPEKAY IYAIPYKLYR ENSIRRYGMH
GTSHLFVSRE AAKLLGKPLE ETNIVSAHLG NGASITAIRG GKSVDTSMGL TPLEGLAMGT
RCGDLDPSII YHLINRLGYT LDEVNHLLNN QSGLLGISEL TNDCRGIEEA VQRGHKGASL
ALDIFCYRLA KYIASYTVPL GRLDALVFTG GIGENSSLVR EKTLNLLEVF KFELDNERNQ
AARFGNRGKI TKDSGPVALV IPTNEEWVIA QDAMALIK
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