| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3445 |
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| Symbol | |
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| ID | 5610924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4194258 |
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| End bp | 4195190 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934385 |
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| Product | 2-dehydropantoate 2-reductase |
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| Protein accession | YP_001475177 |
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| Protein GI | 157376577 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1893] Ketopantoate reductase |
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| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000137485 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCAAC AACTAGTCGA TGAAAAAAAG ATTGCGATTC TGGGCGCCGG CGCCGTAGGT
CAGCTCATCT ACCAACAACT ACTCACCGAC GGGAATGCCC CCCTACTCAT CGCCAGAGAA
AATGAACGGC AAAAGATAGT CACCTTTACC GCTTTAGATG GCCAGGTAAC CAAATCGACA
GCCATACTGG CCTCGCCTAA GAGTGTGTCC CCACTACTTG AACAGGTTCG ACTCCTCATC
GTCTGTGTCA AAGCCTATCA AGTAAGTGAC GCAATAAGAT CTATCATAGA TAAGCTATCC
CCAAAATGTC ACATCATATT GCTTCATAAC GGTATGGGCC CTCATCTCGA GGTACCTGAG
CTTCTCCATG GGCAAGGGTT AAGTTTAGGA ACCACCTCTC AGGCGGCGCT TAAGCACGAA
CGCTGGCACA TAGAACAAAC CGGCTCGGGA AGTACTCAGT TAGGACATCT CACAGGTCCT
CAGCTAAGCC AAGAGTTAAG AACACGCTTG TTGAGCGCCA TTCCAAACAG CCAATGGTGT
GAGCCGATTT TACCTTCGCT CTGGCACAAA CTCGCCATCA ATGCGGCCAT CAACCCTCTC
ACTGCGATAC ATAACTGTAG CAATGGAAAA TTAGCCGAAG AGCAATATTG CAACCAAATC
TCTGCAACGG TTACAGAGTT AGCAGAGGTC GCTTCAGCCG ATGGTATCGA ACTCGATAAG
TCAGCGCTCA TTAACCGGGT ATACGAGGTT ATAGGGCTGA CAGCGGCCAA CTTCTCATCA
ATGCATCAAG ATGTCCTGAA CAAGAGAAAG ACAGAGATTG AGTCGATTAA TGGTTATGTG
GTGCAAAGAG CAAGGCACCA TCAATTATCG ACAAAGGTAA ATTTAAGTCT GCTCGAACAG
GTAAAAAAAA TGGAATCTGA TTACCTCAAA TGA
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| Protein sequence | MGQQLVDEKK IAILGAGAVG QLIYQQLLTD GNAPLLIARE NERQKIVTFT ALDGQVTKST
AILASPKSVS PLLEQVRLLI VCVKAYQVSD AIRSIIDKLS PKCHIILLHN GMGPHLEVPE
LLHGQGLSLG TTSQAALKHE RWHIEQTGSG STQLGHLTGP QLSQELRTRL LSAIPNSQWC
EPILPSLWHK LAINAAINPL TAIHNCSNGK LAEEQYCNQI SATVTELAEV ASADGIELDK
SALINRVYEV IGLTAANFSS MHQDVLNKRK TEIESINGYV VQRARHHQLS TKVNLSLLEQ
VKKMESDYLK
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