| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3429 |
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| Symbol | |
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| ID | 5610439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4179603 |
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| End bp | 4180397 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934369 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_001475161 |
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| Protein GI | 157376561 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.079806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAGTA ATAAAGATTC GTTCGGCAGA ACTCTCTTTG TGGTTGTCGG TTTATGCTTT
ATCTGTTCGG TTTTTGTATC AACCGCAGCG GTATTGCTAC GACCAATTCA GATAGAGAAT
AAATTGCTCG ATAAGCAGAA GTATATTCTT GAAGCTGCAG GCCTTATCGA TACTAAAAAG
GCAAAGGTAG ATAAAGCTGA AGTACTTGAG ACTTACGCTA AGTTCGTTGA AGCTAAACTG
GTTGACCTGA AAACAGGTGA ATGGGTTGAA GGTGATGCAG ATACATTCGA TGCCGATAAG
GCTGCGCGTG ACCTGAAAAA CTCATTCAAA CCACAAAATG ATGTCGCTTC GGTAAAACGT
GTAGCGAATA CAGCTGTTGT CTATGTGGTT AATGATGAGC AAGGTAAACC TAAGACGCTG
ATCTTACCTA TTAAAGGTTA CGGCCTTTGG TCGACCATGT ATGCATTCCT GGCTGTTGAG
CCTGATATTA ATACCATTAA AAGTCTGGTT TATTACTCAT TTACCGGTTC GGGTGAAACA
CCTGGCCTGG GTGGTGAAGT ACAAAACCCT CAGTGGATGG CGAAATGGCA TGGTAAGAAG
CTCTATAACG AGCAAGGGGA GTTAGCGATT AAAGTCACTA AGCTTCCGGC TGTTGCTGCT
TCTGTTCATG GTGTCGATAC CTTGTCTGGT GCAACCTTGA CGGGTAACGG TGTTCAAAAC
TCATTAGATT TTTGGTTAGG TGAGGAAGGT TTTGCTCGCT TTATCGAGAA AGTTCGTAAA
GGAGGGCTGA GCTAA
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| Protein sequence | MASNKDSFGR TLFVVVGLCF ICSVFVSTAA VLLRPIQIEN KLLDKQKYIL EAAGLIDTKK
AKVDKAEVLE TYAKFVEAKL VDLKTGEWVE GDADTFDADK AARDLKNSFK PQNDVASVKR
VANTAVVYVV NDEQGKPKTL ILPIKGYGLW STMYAFLAVE PDINTIKSLV YYSFTGSGET
PGLGGEVQNP QWMAKWHGKK LYNEQGELAI KVTKLPAVAA SVHGVDTLSG ATLTGNGVQN
SLDFWLGEEG FARFIEKVRK GGLS
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