| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3427 |
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| Symbol | |
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| ID | 5613578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4178357 |
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| End bp | 4178965 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934367 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001475159 |
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| Protein GI | 157376559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
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| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACATT ATATTAGTTT GCTAATTCGC TCTATTTTCA TCGAGAATAT GGCACTCTCT
TTCTTCCTGG GGATGTGTAC ATTCCTGGCG GTTTCAAAGA AAGTGACCAC AGCGATGGGA
TTGGGTATTG CAGTAGTTGT GGTACTGGCG ATTTCAGTTC CGGTTAACCA GATCATCTAT
CAGGGGCTGT TAGCGCCTGG TGCGTTGACT TGGGCTGGTC TTCCGGAAGC CGATTTGAGT
TTCTTGAAGT TTATCACCTT CATCGGTGTG ATCGCTGCAC TCGTACAGAT CCTTGAGATG
GTGTTGGATA AGTTCTTCCC ACCACTATAC AACGCTCTGG GGATCTTCCT TCCACTTATC
ACCGTAAACT GCGCAATCTT TGGTGCGGTA TCTTTCATGG TTGAACGTGA TTACAACCTG
GTAGAAAGTA TGGTGTTTGG TGTGGGTTCA GGGCTTGGTT TTGCATTAGC TATCGTCTTG
TTAGCTGGTA TCCGTGAAAA GCTGAAATAT GCTGATGTGC CTGATGGACT ACGTGGCTTA
GGTATTACCT TTGTTACTGC GGGTTTGATG GCGCTTGGAT TCATGTCGTT TTCTGGTGTG
TCCCTATAA
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| Protein sequence | MEHYISLLIR SIFIENMALS FFLGMCTFLA VSKKVTTAMG LGIAVVVVLA ISVPVNQIIY
QGLLAPGALT WAGLPEADLS FLKFITFIGV IAALVQILEM VLDKFFPPLY NALGIFLPLI
TVNCAIFGAV SFMVERDYNL VESMVFGVGS GLGFALAIVL LAGIREKLKY ADVPDGLRGL
GITFVTAGLM ALGFMSFSGV SL
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