Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3416 |
Symbol | |
ID | 5610753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4164945 |
End bp | 4166063 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640934356 |
Product | gamma-glutamyl kinase |
Protein accession | YP_001475148 |
Protein GI | 157376548 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0263] Glutamate 5-kinase |
TIGRFAM ID | [TIGR01027] glutamate 5-kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.181887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAA GTGAGATTGG TTACCGCCGC GTAGTGGTAA AATTGGGAAC AAGTGTACTG ACATCCGGCA GTCGACAGTT GGATAAGGCG CATATGGTTG AGTTGGCGAG GCAGATGGCA GCGTTAATGA AGGCCGGAGT AGAGGTCGTA CTGTGTACAT CGGGGGCAAT CGCCGCCGGC CGTGAACATC TGGGCTACCC CGAACTCCCC GATACCGTAG CCAATAAACA GCTCCTTGCC GCTGTGGGGC AGAGCCAACT CATTTTAGCC TGGGCACAAC TGTTCAGTAT TTATGGCCTG CATGTGGGTC AACTGCTATT AACCCGGGCC GATCTTCATG ACAGAGAGCG CTACCTGAAT GCGCGAGACT CTCTCAATGC GCTGTTGGCT CAGGGCATCA TCCCTATCAT CAATGAAAAT GATGCCGTCG CCACCAATGA GATAAAAGTC GGTGATAACG ATAACCTTTC TGCCCGAGCC GCATTGCTCT GTGATGCAGA CCTGCTGATC CTGTTAACCG ACCAGAGGGG ACTTTTCGAT GCCGATCCTC GCTCGAACCC TGATGCAAAA CTCATTAAGC AAGTGGTCAA TATCGACGAC AGTCTACGCC TCCTCGCCGG TGGCGCCGTC TCAGGTCTGG GAACCGGAGG CATGGCAACT AAGCTAGAGG CGGCTGATAT TGCGAGGCGT GCCGGTGTCG AAGTGATTAT TGCATCCGGG CACCATCCCA GGGTGATACA AGATGCCGTT TGCAAGGAGT CAGTTGGTAC TCACTTTACG GCGCTGGAAA ATCCATTGGA GAGCCGTAAA CAGTGGATCT TAGCCGGTCA GGCAACCAGA GGTAAGTTGA TATTGGATCA AGGTGCCCTA AATGCCGTGA CTCAAAAGGG GAGGAGTTTG CTCTCTAAGG GCATAGTCAG AGTCGAAGGC AAGTTTGAGC GAGGTGCAAC GCTGCATCTT GTCGATAGTG ATGGAAGGGA GTTTGCGCGG GGCATGAGTC GCTACAGTGC CAAAGATCTG CATCTGATAG CGGGTAAGCA CTCGGATGAT ATCGAGTCGC TGCTTGGCTA CGATTATGGT GATGCCGTGG TTCATCGTAA TGATATGGTC GTTCTTTAG
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Protein sequence | MNLSEIGYRR VVVKLGTSVL TSGSRQLDKA HMVELARQMA ALMKAGVEVV LCTSGAIAAG REHLGYPELP DTVANKQLLA AVGQSQLILA WAQLFSIYGL HVGQLLLTRA DLHDRERYLN ARDSLNALLA QGIIPIINEN DAVATNEIKV GDNDNLSARA ALLCDADLLI LLTDQRGLFD ADPRSNPDAK LIKQVVNIDD SLRLLAGGAV SGLGTGGMAT KLEAADIARR AGVEVIIASG HHPRVIQDAV CKESVGTHFT ALENPLESRK QWILAGQATR GKLILDQGAL NAVTQKGRSL LSKGIVRVEG KFERGATLHL VDSDGREFAR GMSRYSAKDL HLIAGKHSDD IESLLGYDYG DAVVHRNDMV VL
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