| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3412 |
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| Symbol | |
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| ID | 5610756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4159768 |
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| End bp | 4161840 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934352 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001475144 |
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| Protein GI | 157376544 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0581677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAGAG TCGGAATTCT ACTGTTGTGC ATCTTGCTGC CTGTTGCATC GGCGTTTGCT
GAGCAAGCTA AGTCTGAGCA GGCTAAGTCT GAGCAGGCTA AACCTGAACA AGCTACAACA
CTATCTGTCG ATCTGTTGTG GCAACTGAAG CGTATCGGTA GTCCAATTGT TTCGTCATCG
GGTGAGTATA TTATTGCGCC TGTAACCCAA TATGATGTTC CTGAAGACAA AGGTGCGACG
CAACTGTGGC TGTTTGCTAA AGATGGTTCT AACCAGCGGC CAATAACTGC TGAAGGTCTG
CTGGTCAGTG AGCCGGTTTT CTCGCCTGAT AGTAAGACAT TAGCTTTTGT GAGCAAGCGT
GATAAAGACG AAGCCGGGCA AGTGTATCTG TTGCCGATGG ATAGCCCAGG TGAAGCGCAG
CGACTCACCA ATGTACCGGG TGGTGTTAAA GGCGTGAAAT GGGTCGGTGA ACATGTTTAC
TTTATTAGCC GTGTTTTCCC CGGTAAAAAC TGGGACGAAA TGGCGGAGCA GTTAAGAGCC
AATGAAGACG ATAAAGTTTC TGCACGTCAA TGGAACGCGC TGCCCTATTC CAGTTTTGAT
CACTGGATTG AGGAGGACCG CCAAGCGCAC GTTTTCCGTA TTCCTGCAAA GGGTGGTGAG
GTTGAAGCCA TCACACAACC GATGAATAAA CAGTTACCCC GTTCATCTCA AAGTGCTGCG
AACTACGATA TCTCAGCCGA TGAACGTCTG ATTGCGTTTA ATAGCAATGG TTGGGAAAAC
CAGGTCGATC CTAAAGTTGA TATCTTTATG GCAAAGATTG GCAGCGATAA AGTGGAAAAC
TTAACCCAAA AGAATGAAGC TCCAGACACT AACCCGACCT TTAGTCCTGA TGGTAAAACG
TTAGCGTTTA CCCGTCAGCT TATTCATGGT TTTTATGCCG ATACTGCTAA CTTGGTGTTA
TTCGATGTAA AGAAACGCAC TGAACGTGAA ATTACAACTG ACTGGGATCG CTCTGTTACT
CGCTTTAGTT GGACCGCCGA TAGTAAAGGC TTCTACGCCG CTATAGATGA CGCTGCAACC
CGCCGCATTT ATCATATCGA TGCCAAAAGT AGCAAAATCA AACCTATCAC CAAACAAACC
AACTTCGGCA AGCCTTCTAT TGCACAAGAC GGCACGTTAG TGGCGGCAAA CGATAGCTTT
TTATACCCAG CTCGCGTAGT AAAAATTAAT CCCAATAACG GTAAAACTAT ACGTTTAGAT
AGTTTCAATG ACGATATTCT TGCCGATGTA GATATGGGAA CCTATGAGTC GGTAACCTAT
AAAGGTTATA ACGATGAAGA TGTACAGATG TGGGTGCATT ACCCGCCAGG GTTCGATAGC
AGCAAAAAGT ACCCGTTGAT GATGCTGATC CACGGTGGTC CACATGGCGC TATTTCTGAT
GGCTTCCATT ACCGCTGGAA TGCACAGACA TTTGCCTCTT GGGGATATGT AACTGCGTGG
CCTAATTTCC ACGGCTCAAA TAGTTTCGGT CAAGATTATA CCGACAGCAT TAACCCCGAT
TGGAAAAATA AGTCATTGGA AGATGTCTTT AAAGCCACCG AGTGGTTTAC GCAAAAAGAG
TGGATCGATA ACGATCGCTT AGTGGCTGGT GGCGCAAGTT ATGGCGGGTA CCTAACCTCA
ATTATCTTAG GTCAGGAGCA TCCGTTTAAC GCCCTGTTTA TCCATGCCGC GGTTTATAAC
ATGTACTCGC AGATGGCAGC GGACTTCTCA GTACACAGCA CTCGATTTGG CAGCTATTGG
GAAAAGCCTG AAATTTATAA AGCTATCTCA CCCCATTACG GTGCTAAAAA TTTCAATACT
CCAACCTTAG TGGTTCATGG GCAGCTGGAT TACCGTGTTC CTGTTGGTCA AGGCTTCGAG
TTATTCCGCA CCTTGCAAAC TCGCGGTGTA GAATCTCGCA TGATCTACTT CCCCGATGAA
AACCATTGGA TCATGAAGCC AAATAATTCA ATTTATTGGT ATAACCAAGT GGAAGACTGG
ATGAACAAGT ATGCTGAGCC TGGTGGGAAG TAG
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| Protein sequence | MKRVGILLLC ILLPVASAFA EQAKSEQAKS EQAKPEQATT LSVDLLWQLK RIGSPIVSSS
GEYIIAPVTQ YDVPEDKGAT QLWLFAKDGS NQRPITAEGL LVSEPVFSPD SKTLAFVSKR
DKDEAGQVYL LPMDSPGEAQ RLTNVPGGVK GVKWVGEHVY FISRVFPGKN WDEMAEQLRA
NEDDKVSARQ WNALPYSSFD HWIEEDRQAH VFRIPAKGGE VEAITQPMNK QLPRSSQSAA
NYDISADERL IAFNSNGWEN QVDPKVDIFM AKIGSDKVEN LTQKNEAPDT NPTFSPDGKT
LAFTRQLIHG FYADTANLVL FDVKKRTERE ITTDWDRSVT RFSWTADSKG FYAAIDDAAT
RRIYHIDAKS SKIKPITKQT NFGKPSIAQD GTLVAANDSF LYPARVVKIN PNNGKTIRLD
SFNDDILADV DMGTYESVTY KGYNDEDVQM WVHYPPGFDS SKKYPLMMLI HGGPHGAISD
GFHYRWNAQT FASWGYVTAW PNFHGSNSFG QDYTDSINPD WKNKSLEDVF KATEWFTQKE
WIDNDRLVAG GASYGGYLTS IILGQEHPFN ALFIHAAVYN MYSQMAADFS VHSTRFGSYW
EKPEIYKAIS PHYGAKNFNT PTLVVHGQLD YRVPVGQGFE LFRTLQTRGV ESRMIYFPDE
NHWIMKPNNS IYWYNQVEDW MNKYAEPGGK
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