| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3330 |
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| Symbol | |
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| ID | 5610277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4047032 |
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| End bp | 4047661 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934268 |
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| Product | heat shock protein GrpE |
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| Protein accession | YP_001475062 |
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| Protein GI | 157376462 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000166428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG ATTCGAGTAA AGCGAAACAG AACCAAGTAG ATGAAGCTGT TGAGGGTGAA
ATCATCACAG ATAATGAAAA TGAAACTGTT ACAGGTGAAG CCAGTTTGAT GGATGAACTT
ACTCAGGCAA ACTTTCGTGT TGAAGAGCTT GAGCAGGCAT TAGAAGCCGC GACAGCCAAA
GTTGATGAGC AAAAAGATTC TGTTATCAGA GCCGCTGCCG AGGTTGATAA TATTCGTCGT
CGTGCCGCTA TCGATGTTGA GAAAGCCCGT AAATTTGCCC TTGAAAAGTT TGCTAATGAA
CTTCTGCCGG TGATTGACAA TATGGAGCGC GCGCTTCAGG GAACCGATGC TGAAGCTGAG
GCGACTAAAG CTGTCTATGA AGGTGTGGAG TTAACACTGA AGAGCTTTAT TGGTACGGTT
GAAAAGTTTG GATTGACAGT GGTTAACCCT CAGGGGGAAA CCTTTAATCC AGAGCATCAT
CAGGCTATCG GTATGCAACC AAGCCCGGAT TTTCCTGCTA ACACAGTCAT GATGGTTATG
CAGAAAGGCT ACATCCTTAA CGAGCGTCTA TTACGACCGG CTATGGTCAT GGTGTCTCAA
GGCGGAGCCG CTGTAGATAC ACAGGCTTAA
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| Protein sequence | MSNDSSKAKQ NQVDEAVEGE IITDNENETV TGEASLMDEL TQANFRVEEL EQALEAATAK
VDEQKDSVIR AAAEVDNIRR RAAIDVEKAR KFALEKFANE LLPVIDNMER ALQGTDAEAE
ATKAVYEGVE LTLKSFIGTV EKFGLTVVNP QGETFNPEHH QAIGMQPSPD FPANTVMMVM
QKGYILNERL LRPAMVMVSQ GGAAVDTQA
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