| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3264 |
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| Symbol | |
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| ID | 5614145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3962654 |
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| End bp | 3964324 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934202 |
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| Product | putative sulfatase |
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| Protein accession | YP_001474996 |
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| Protein GI | 157376396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.225612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTT TGCTAAACCG TTTCTCAAAA TGCCAATTGA GCACGAATCA ACTTATCCTA
TTGGTTGCAC TCTACTTTAC TCTGGTATTT AACTTTCCTT TCCTGAAAGA GGTGACCACC
ACGGTACTGG CCTTAGATGA CTTTAATCTG CTATTTCTCG CCACGGTCCC GGTTCTGGCA
TTCAACCTAT GTACGATTCT GTTTTCACTT TTTTCAGCAA GACCCATGCT AAAGCCCGTC
CTGATCGGTT TGACTCTTAT CTCCTCTTTA GTTTTCTATG CCAAGGTGAG TTATGGCGTC
GTATTCGATT ACGGTATGAT CCAAAATTCG GCTGAAACCC ATACGGCAGA GGCATTGTCT
TACCTGAACT GGCATGTTGC GGCATTCTTT CTGTTTACCG GTGTGTTACC GGCGGCCTTT
ATCCTGCTGG TAAAAATTAA GCATTACCCG AGGCTAAAGT CTTTGGTATC GAGAATAAAG
TTAGTCGCGA CCTCTATACT GTCAATACTC ATCATCGCCG CTCTTTTTTA CCCTAACTAC
GCCTCTGTTG GGCGTAATAA CAGACAGCTA CAAAAATCTT CCGTCCCCTT TCAATATCTG
GTCGACAGTT TTAAATACAC AAGAGACCAA TATTTTACCG AGCCAAGAAG CTTTAAGACT
CTGGACAGCC ATCCCAGTCT GAACAACACC GATGTTAAAC ATAAAAAAGT AATTGTCATG
GTGCTGGGTG AAACGGCCAG AGCCCAAAAT TTCTCATACA ACGGCTATGG TAAGCCGACA
AACCAGGCCA CCGAAAAATA CAAGCTGATA TCGTTTGAGC ATATGTTTTC ATGCGGAACG
GCAACGGCGG TGTCCGTTCC CTGCATGTTC TCGGCTCTGA CCAGAAGCAG TTTCGATAAT
CTTGATGCTG AGTATGAGCA AAATTTAGTG GATCTCGTAT CGCTGGCCGG AGTCGATGTA
CTTTGGGTAG ACAACAATGG CTGTAAGGGT GTGTGTGAAC GCGTGCCCAC CATCAATATC
GATGTGAAAT CCAATAACCC TCTGTGTGAT GGTGAATACT GCTTAGATGA AGTGCTACTC
GAACCGCTTC AAGAGAAACT TGCAAACTTA AGCGCTCCTA CCACCCTAGT TGTGCTCCAT
ATGATAGGTT CTCATGGGCC AACCTATTTC AGACGTTACC CCAGTGAAAC TCGCCCCTTC
AAGGACGACT GTCAAAGAAG TGATATACAA AATTGTTCTC CTGAGTCTCT GCTCAATACC
TACGACAATA CTATTGCCTA TACCGATCTG GTGTTATCTA AGGTCATCGC AAGCCTCAAT
GCCCTGCCAC AGGATGTACA GCCCTCTATG CTATATGTCT CCGATCATGG TGAATCGCTC
GGTGAATCCG GCGCCTACCT ACACGGTTTT CCCTATGCGT TCGCCCCAGA AGAGCAGAAG
CACATCCCCT TATTGGCCTG GTTTCCCGAG CAACGAAGCC CGTATATTGA TACCGCTTGT
CTTCAAGACC AAGCAAAGAG AGATACCTTC AGTCACGACA ATATCTTCCA TAGCATGTTG
GGGATGTTGA ATGTTCACTC GACGCAATAC GATAAAGAGT TAGATATGTT CGCAAAGTGT
ATGCAGACCC CATCTCAAGA GGGGATGAGG CTCACTCAAC TGCAGAATTG A
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| Protein sequence | MSSLLNRFSK CQLSTNQLIL LVALYFTLVF NFPFLKEVTT TVLALDDFNL LFLATVPVLA
FNLCTILFSL FSARPMLKPV LIGLTLISSL VFYAKVSYGV VFDYGMIQNS AETHTAEALS
YLNWHVAAFF LFTGVLPAAF ILLVKIKHYP RLKSLVSRIK LVATSILSIL IIAALFYPNY
ASVGRNNRQL QKSSVPFQYL VDSFKYTRDQ YFTEPRSFKT LDSHPSLNNT DVKHKKVIVM
VLGETARAQN FSYNGYGKPT NQATEKYKLI SFEHMFSCGT ATAVSVPCMF SALTRSSFDN
LDAEYEQNLV DLVSLAGVDV LWVDNNGCKG VCERVPTINI DVKSNNPLCD GEYCLDEVLL
EPLQEKLANL SAPTTLVVLH MIGSHGPTYF RRYPSETRPF KDDCQRSDIQ NCSPESLLNT
YDNTIAYTDL VLSKVIASLN ALPQDVQPSM LYVSDHGESL GESGAYLHGF PYAFAPEEQK
HIPLLAWFPE QRSPYIDTAC LQDQAKRDTF SHDNIFHSML GMLNVHSTQY DKELDMFAKC
MQTPSQEGMR LTQLQN
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