| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3251 |
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| Symbol | |
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| ID | 5613874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3944786 |
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| End bp | 3946369 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934189 |
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| Product | catalase |
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| Protein accession | YP_001474983 |
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| Protein GI | 157376383 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0131628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGC ACATATCGAT CAATAATATT TACAGGCAGA AAGAGCACAA CGTTATACAT
TTAAGAGACC CCCCAATGGA TCTAACAAAA AGCTGTTTAG TAATATCGAT GAGTCTGGCA
TTTACCGTAC AGGCTGAAAC ATTAACCCGT GACAATGGTG CACCGGTAGG TGATAACCAA
AACTCAATCA CGGCCGGTAG TAACGGCAGC GTACTTCTTC AAGACGTTCA ACTTATTCAG
AAACTACAAC GCTTCGCCCG TGAACGTATT CCTGAGCGTG TAGTGCATGC CAGAGGTACT
GGAGTGCATG GAGAGTTTAT CTCGAGTGGA GATTTCGGTG AACTCACTCA AGCGGCACCA
TTTGCTAAAA AAAATAAGGT GACACCTGTA TTTGTTCGTT TCTCAACGGT GGTCCACTCC
AAAGGCTCTC CTGAAACTCT TCGTGATCCC CGTGGGTTCG CCACCCGTTT TTACTCCGAG
CAGGGTAACT GGGATCTGGT TGGTAACAAT CTACCGGTAT TCTTCATCCG CGATGCAATA
AAGTTTCCGG ACATGGTGCA CTCACTAAAA CCATCGCCGG TAACCAATAA GCAAGACCCT
AACCGCTTCT TCGACTTTTT CAGCCACGAA GCGACGGCAA CCAATATGCT GACTTGGGTT
TATACCAATT TAGGTACGCC TTCCAGTTAC CGTAAGATGG ACGGCTGGGG TGTACACGCT
TACAAGTTTA TTAATGATGA AAACCGGGTT AAATACGTTA AGTTCCATTG GGTGAGTCAA
CAGGGTGTCG AAGGACTAAG ACCCAATGAA GTCACAAAAA TACAGGGGCA GAACTTTAAT
CACCTGACCG ATGATCTTTA TAGCCAAATA GATCAAGGTA ACTTCCCTAA ATGGGACCTT
AAGGTCAAAG TAATAAGCCC TGAAGATCTG AACAAGTTTG ACTATAACCC ACTCGATGCA
ACCAAGATGT GGCTGGATGT GCCTGAAACT AAGGTGGGCA CCATGACACT CAATCGTGTT
CCCGACAACT TCTTCCAGGA GACTGAACAG GCGGCATTTG CCCCATCAAA TCTGATCCCG
GGCATAGAGC CATCTGAAGA TAGATTATTG CAGGGACGTA TCTTCTCATA TGCCGATACT
CAACTGTATC GCCTGGGGGC CAACCTATCT CAGCTGCCGA TCAACCAAGC TAAGGCCAAT
GTAGCTAATC ATAACCAAGA GGGAGCGGCT AATTTCGGTA ATACACGCTC TGATGTTAAC
TATCAACCTA GTGTCAACTT AGATCTGGCT GAAGATGCGC GCTATCGTTC GGTAAACACA
CCTCTGTCCG GTACGGTTCA GCAGGCGGCT ATCCCTAAGC AAGATAACTT CACTCAGGCA
GGCATCTTGT ACCGTAGCTT AAGCAAACAA GACAGGAGCG ACCTTATTAC TAACCTATCG
GGCGATCTGG GGAAAGTAAG AGATAGCAAT GTGAAGCACC AGATGCTGAG CTACTTCTAT
CAAGCCGATA AGGATTTTGG TGAACGACTC ACTAAGGCCG TGAACGGTGA TCTGAGCGAA
GTGAAAAAAA GAATAAAAAG TTAA
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| Protein sequence | MQSHISINNI YRQKEHNVIH LRDPPMDLTK SCLVISMSLA FTVQAETLTR DNGAPVGDNQ
NSITAGSNGS VLLQDVQLIQ KLQRFARERI PERVVHARGT GVHGEFISSG DFGELTQAAP
FAKKNKVTPV FVRFSTVVHS KGSPETLRDP RGFATRFYSE QGNWDLVGNN LPVFFIRDAI
KFPDMVHSLK PSPVTNKQDP NRFFDFFSHE ATATNMLTWV YTNLGTPSSY RKMDGWGVHA
YKFINDENRV KYVKFHWVSQ QGVEGLRPNE VTKIQGQNFN HLTDDLYSQI DQGNFPKWDL
KVKVISPEDL NKFDYNPLDA TKMWLDVPET KVGTMTLNRV PDNFFQETEQ AAFAPSNLIP
GIEPSEDRLL QGRIFSYADT QLYRLGANLS QLPINQAKAN VANHNQEGAA NFGNTRSDVN
YQPSVNLDLA EDARYRSVNT PLSGTVQQAA IPKQDNFTQA GILYRSLSKQ DRSDLITNLS
GDLGKVRDSN VKHQMLSYFY QADKDFGERL TKAVNGDLSE VKKRIKS
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