Gene Ssed_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3233 
Symbol 
ID5611633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3925914 
End bp3926201 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content40% 
IMG OID640934171 
Productputative ferredoxin 
Protein accessionYP_001474965 
Protein GI157376365 
COG category[C] Energy production and conversion 
COG ID[COG2440] Ferredoxin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CAGTCAATGT AGACGTAAAA CTTGGCGTCA ATAAGTTTCA TGTAGATGAA 
GGTCATCCAC ATATTATCTT GAAAGATAAT CCGAATATGA CCGAGTATCG CAAATTGGTA
AACGCCTGCC CTGCTGGTTT GTATAAACTT GAAGAAGATG GCTCTATCCG TTTCGATTCT
GCGGGTTGTT TGGAGTGCGG TACCTGTAAG TTTCTTTGTG GTGACACAAT TTTAGAAAAA
TGGGAATACC CAAGAGGAAC ATTTGGTATC GAATACCGAT ATGGATAA
 
Protein sequence
MTETVNVDVK LGVNKFHVDE GHPHIILKDN PNMTEYRKLV NACPAGLYKL EEDGSIRFDS 
AGCLECGTCK FLCGDTILEK WEYPRGTFGI EYRYG