Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3231 |
Symbol | |
ID | 5611631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3923589 |
End bp | 3924533 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640934169 |
Product | electron transfer flavoprotein, alpha subunit |
Protein accession | YP_001474963 |
Protein GI | 157376363 |
COG category | [C] Energy production and conversion |
COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.7218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCA AACTGTCTAA TGTATGGGTA TTTAGTGATA TCGCTTCCCG TTTACCTGAA GTTATCGCCG GCGGTGTTCA GCTAGGCGAA AAAGTCTCGG CTTTCGTGAT TGGCTCAGAA GATGAGATAG CTAAAGCATA CTCACTGGGT GCAACCCATG TGTATTACCT GGGTGAAAAA GATACCAGCA AGATTATTGA AGATTATGCT GAGACTATGG CCCATGCCAT CTCAAATGGC GACACAAATA CCTTAATGCT GCTCGGTGCA ACCAAGCGCG GAAAAGCACT GGCTGCAAAA TTGGGTGTAC AACTTAATGC CGGCGTTATC AACGATGCCT CTGAAGTCAC TGTAGCTGAT GGCGTAACAG CCAAGCACAT GGTCTACGGC GGCCTGGCTA TCGGTGAAGA AAAAATCGTA TCACCTATTG CGCTTATCAC TATCGGCAAT GGCGTATTCG AAGCCGCCCA AGCCGACAAT TCGAAAACCG GTGAAGCGGT TTCGGTTTCA TTTATCGAAC CAAAAGCGGC GATCAAGTGC ATCGAACGCC GTGCTAAGCA AGGTGAAAGC GTTGACTTAG GTAAGGCAAA ACGCGTCATT GCTATCGGTA GCGGCATCGG CAAGCAAGAA AACCTTCAGA TGGTTGCCGA TCTCGGTGCT GCACTTGGTG CAGAGCTGGG TTGTTCTCGT CCGATTGCCG AAACTGAAAA GTGGATGGAG CGCGAGCGTT ACATCGGAGT TTCAGGGGTC ATGCTAAAAC CAGAACTCTA TCTGGCTCTT GGCATCTCTG GACAGATCCA GCATATGGTT GGCGCATTAG GTTCACAAAC TATTCTTGCG GTAAACAAAG ATAAGAATGC ACCAATCTTC CAATATGCTG ACTACGGAAT TGTTGGTGAC CTGAATAAGG TTGTACCGGC ACTGATCAGC GCCTTTAAAG GTTAA
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Protein sequence | MMSKLSNVWV FSDIASRLPE VIAGGVQLGE KVSAFVIGSE DEIAKAYSLG ATHVYYLGEK DTSKIIEDYA ETMAHAISNG DTNTLMLLGA TKRGKALAAK LGVQLNAGVI NDASEVTVAD GVTAKHMVYG GLAIGEEKIV SPIALITIGN GVFEAAQADN SKTGEAVSVS FIEPKAAIKC IERRAKQGES VDLGKAKRVI AIGSGIGKQE NLQMVADLGA ALGAELGCSR PIAETEKWME RERYIGVSGV MLKPELYLAL GISGQIQHMV GALGSQTILA VNKDKNAPIF QYADYGIVGD LNKVVPALIS AFKG
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