| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3160 |
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| Symbol | tsf |
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| ID | 5610305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3816817 |
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| End bp | 3817665 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934098 |
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| Product | elongation factor Ts |
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| Protein accession | YP_001474892 |
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| Protein GI | 157376292 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0264] Translation elongation factor Ts |
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| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000947375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.213818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATTA CTGCTGCCCA AGTTAAAGAA CTTCGTGACC GCACTGGCGC TGGCATGATG
GATTGTAAGA AAGCATTGAC TGAAACTGAT GGTGACATCG AACTAGCAAT TGATAGCATG
CGTAAGAGCG GTGCTGCAAA GGCTGCCAAA AAAGCAGGTA ACATCGCTGC TGAAGGTACA
ATCCTTATTA AGAATGGCGA AGGTTACGCT GCACTTTTAG AAGTTAACTG TCAAACAGAC
TTCGTTGCAA AAGACGCAAA CTTCCTAGCA TTTGCTAACG CTGTTCTAGA GGTTGCTGCT
GCATCTAAAG TCACTATCGA AGATTTGAAA GCACAGTTTG AAGAGACGCG TATTGCACTC
GTTACTAAAA TCGGTGAAAA CATCAACGTT CGTCGCGTTG AGTACATTGA TGGTGCAAAC
CTTGCCTCTT ACCGTCACGG TGAGCGCATC GGTGTAGTTG TTGCCGGTGA AGCTGACGAA
GAGACGCTAA AGCACGTTGC AATGCACGTT GCTGCTTCTA AGCCTGAGTT CGTTAACCCT
GAAGATGTTC CGGCTGATCT TGTTGAGAGA GAGAGAGCAC TTCAGATCGA AATCGCTATG
AACGAAGGCA AGCCTGCAGA GATTGCTGAG AAGATGGTTT TCGGTCGCAT GAAGAAGTTC
ACTGGTGAGA TCTCTCTTAC TGGTCAAGCT TACATCATGG AACCTAAGAA AACTGTTGGC
GCAATTCTTA AAGAGAAAGG CGCTACGGTA TCTAACTTCG TTCGTTTAGA AGTTGGCGAA
GGTATCGCGA AGAAAGAAGA AGATTTTGCT GCTGAAGTAG CTGCACAAAT CGCTGCTACT
AAGGCTTAA
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| Protein sequence | MAITAAQVKE LRDRTGAGMM DCKKALTETD GDIELAIDSM RKSGAAKAAK KAGNIAAEGT
ILIKNGEGYA ALLEVNCQTD FVAKDANFLA FANAVLEVAA ASKVTIEDLK AQFEETRIAL
VTKIGENINV RRVEYIDGAN LASYRHGERI GVVVAGEADE ETLKHVAMHV AASKPEFVNP
EDVPADLVER ERALQIEIAM NEGKPAEIAE KMVFGRMKKF TGEISLTGQA YIMEPKKTVG
AILKEKGATV SNFVRLEVGE GIAKKEEDFA AEVAAQIAAT KA
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