| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3159 |
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| Symbol | pyrH |
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| ID | 5610304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3815990 |
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| End bp | 3816727 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934097 |
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| Product | uridylate kinase |
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| Protein accession | YP_001474891 |
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| Protein GI | 157376291 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0528] Uridylate kinase |
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| TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000796421 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.227904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACGA ATCCTAAACC TGCATTTCGA CGTATTCTTC TAAAGTTAAG TGGCGAAGCC
TTAATGGGCG AAGAAGGCTT TGGTATCGAT CCTAAAGTAT TGGATCGTAT GGCTCAAGAG
ATTAAAGAAC TGGTTGAGCT CGGCATTCAG GTAGGTGTTG TTATCGGTGG TGGGAACCTA
TTTCGTGGCG AAGGACTGGC ACAAGCTGGC ATGAACCGCG TTGTTGGTGA CCATATGGGT
ATGCTTGCAA CTGTGATGAA TGGTCTGGCG ATGCGTGATG CTTTGCATCG TGCTTATGTC
AATGCAAGAC TGATGTCTGC AATTCCTTTG AAGGGCGTGT GTGACGATTA TAACTGGGCT
GAAGCGATTA GCTTATTAAA GTCTGGTCGT GTTGTTATTT TTGCTGCGGG AACGGGTAAT
CCTTTCTGCA CCACAGATTC TGCTGCATGT CTACGCGGAA TTGAGATTGA AGCTGAAGTC
GTCATTAAAG GAACCAAAGT AGACGGTGTC TATTCAGATG ATCCGGTTAA GAACCCTGAT
GCAGTAAAAT ATGATGAAAT GGGTTACGAT GAAATTCTCG ACAAAGAGTT AAAAGTGATG
GATCTGGCAG CATTTACTAT GGCTAGAGAT CACAATATGC CATTATTGGT ATTTAATATG
AATAAACCTG GTGCCCTTCG TCGTGTAATA ATGGGTGAGC AGGAAGGTAC AATGATCAAG
GCTCAATCAG CCGAGTGA
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| Protein sequence | MSTNPKPAFR RILLKLSGEA LMGEEGFGID PKVLDRMAQE IKELVELGIQ VGVVIGGGNL
FRGEGLAQAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYNWA
EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEAEV VIKGTKVDGV YSDDPVKNPD
AVKYDEMGYD EILDKELKVM DLAAFTMARD HNMPLLVFNM NKPGALRRVI MGEQEGTMIK
AQSAE
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