Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3149 |
Symbol | |
ID | 5610180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3805634 |
End bp | 3806401 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640934087 |
Product | UDP-N-acetylglucosamine acyltransferase |
Protein accession | YP_001474881 |
Protein GI | 157376281 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000142053 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0438319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAGATA AATTAGCGTA TATTCATCCT GATGCAAAAA TTGGTAATAA TGTCACTATC GGCCCATGGA CCTATATTGG TGCAGATGTC GAGATTGGTG ATGATTGTTG GTTGAGCTCC CATGTGGTAG TTAAAGGGCC AACGGTTATC GGCAAAGGCA ATAAAATTTT TCAGTTTGCC TCGGTAGGTG AAGATTGCCA AGATAAAAAG TATGCAGGCG AAGCTACGCG ACTCATCATG GGTGATAATA ATATCATTCG TGAATCGGTG ACGATTCATC GTGGAACGAC CCAAGATAAG GGTGAGACTC GTATAGGCTC AAACAATCTG TTTATGGCTT ATGTGCATAT CGCTCATGAC TGTGTCGTTG GTAACAACGT CATCATGTCA AACAATGCGT CAATTGCCGG ACATGTACAT GTTGGTGATT GGGCTATTCT TGGTGGGTTA ACGGGTGTGC ATCAGTTTGT TCATATCGGA GCTCATGCGT TTACTGCGGG TTACTCTCTT ATCCTTCAGG ATGTTCCTCC GTTTGTGATG GCATCGGGTC AACCCGGGAT CCCACGCGGT TTGAACAGCG AAGGTATGAA ACGCCGCGGT TTCTCGAAAG AGAGCCAGAT GGCGGTCCGT CGTGCCTATA AGACGCTATA CCGTAAAGGC TTGACTGTCG ATGAGGCTAT CGCTGCCTTA TCGGAAGAGT CAGATGATGA ACAAGTAAAG TTTATGATTG ATTTTGTCTC CAACTCCAGC CGCGGTATCA TTCGCTAA
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Protein sequence | MIDKLAYIHP DAKIGNNVTI GPWTYIGADV EIGDDCWLSS HVVVKGPTVI GKGNKIFQFA SVGEDCQDKK YAGEATRLIM GDNNIIRESV TIHRGTTQDK GETRIGSNNL FMAYVHIAHD CVVGNNVIMS NNASIAGHVH VGDWAILGGL TGVHQFVHIG AHAFTAGYSL ILQDVPPFVM ASGQPGIPRG LNSEGMKRRG FSKESQMAVR RAYKTLYRKG LTVDEAIAAL SEESDDEQVK FMIDFVSNSS RGIIR
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