| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3128 |
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| Symbol | |
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| ID | 5611246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3774674 |
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| End bp | 3775345 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934066 |
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| Product | ArsR family transcriptional regulator |
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| Protein accession | YP_001474860 |
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| Protein GI | 157376260 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0607] Rhodanese-related sulfurtransferase
[COG0640] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.141213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAAAG AGATAAATAA AATGAGCCAG TTTAAGAAGT CCCTCAATGA GCAGTTTTCT
GTCATTGCCA AGGCTATGAG TAACCCAAAC CGCCTGGAGA TGCTGGAGTT TTTAGCCCAG
TGTGAATACT CCGTCGATGA TCTCGCAAAG GTCATGGGGT TGAGCGTAGC CAACACTTCA
CATCACCTTC AGCAACTGCG GCTCGCAGGG TTAGTTGCCT CTCGAAAAGA AGCCCAACGC
GTCTTCTATC GTTTGAAGGG AGATGGTGTT GTAGAGCTGA TGGCGAGCAT GAAGCGTGTT
GCGGAAAGCC ATGTTACTGA GGTAAAAGAA TTAGTTAATA CTTATTTATA CTCTAAAGAT
GAGATGGAGC CTATTCCCCG CGAAGAACTG TTAAAAAGGG CATCAGAAGG CTCCGTCACT
GTGATTGATG TTCGTCCTTC GGTAGAGTAC GCATCGGGGC ACTTACCCGG AGCGATTAAC
CTTACAGTCG AAGAGCTTAA GAAGCAGTTT TCTGTAATCG AACCTAACCA AGAGGTTATC
GCCTACTGCC GCGGCGCACA CTGTATTCTG GCTTTTGAAG CAGTAGAATT TTTGCGTTCT
AAGGGATTTC AAACACGACG ACTCGAGGAT GGCTTCCCCG AGTGGAAAAG TGCCGGCTTC
CCCATTAATT AA
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| Protein sequence | MTKEINKMSQ FKKSLNEQFS VIAKAMSNPN RLEMLEFLAQ CEYSVDDLAK VMGLSVANTS
HHLQQLRLAG LVASRKEAQR VFYRLKGDGV VELMASMKRV AESHVTEVKE LVNTYLYSKD
EMEPIPREEL LKRASEGSVT VIDVRPSVEY ASGHLPGAIN LTVEELKKQF SVIEPNQEVI
AYCRGAHCIL AFEAVEFLRS KGFQTRRLED GFPEWKSAGF PIN
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