| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3089 |
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| Symbol | |
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| ID | 5611005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3726110 |
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| End bp | 3727030 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640934026 |
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| Product | response regulator receiver modulated CheW protein |
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| Protein accession | YP_001474821 |
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| Protein GI | 157376221 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA TTCTTGAATC AGTTAATAAA CGCACGCAGT TAGTCGGGCA AAACCGTTTA
GAGCTTTTAT TATTTAAACT AAACGGTCGT CAAAGATTCG GTATCAACGT ATTTAAAGTC
AAAGAGGTGT TGCAATGCCC GCCTCTTACA AGCTTGCCTA AGTTAAATAG TACTGTGAAA
GGTGTGGCGC ATATTCGTGG TAACACTATC TCAGTCATAG ACTTGAGTGC TGCAACTGGT
GGTCGTCCTA TCGAGAATAC CGAAGGTTGC TTCATCATTA TCGCGGAATA TAACCGCAGT
GTGCAGGGTT TTTTGGTTAG CTCTGTGGAG CGGATCATCA ATATGAACTG GGAAGCCATT
TTGCCACCGC CACAAGGTGC CGGCAGGTAT TCCTACTTAA CCGCTGTGAC AGAAATAGAG
GGAGAGTTAG TCGAGATCCT CGATGTTGAA AAAATTCTCG ATGAGATATC TCCGGTTAAA
ACCGAGATTA GTCAAGAGAC CGATGAAGCC ATAACCATCG ACCGGGAACA ACATTTCCAT
ATTATGGTTA TTGATGACTC GGCTGTGGCT CGCAAGCAGA TCATCAGGGC ACTCTCGTCA
TTGGGCTTAC AAATTGATAC GGCTATCGAT GGTCGGGATG CGCTCGATAA ACTCAATAAA
ATCGCTGCAG AGATGGATAA TGTAGCGACT GAAATCCCAT TGATCATTTC AGATATTGAG
ATGCCTGAAA TGGACGGCTA CACTTTAACT GCAGAGATAA GGGATAACCC TAAGTTAAAA
GATATTAAAG TGGTATTGCA CACATCATTA AGCGGCGTAT TTAATCAAGC TATGGTTCAG
AAAGTAGGAG CTAATGATTT TATTGCGAAA TTTAACCCAG ATGAACTTGC AGCAGCAGTG
AACAAGCATT TGAGTCTATA A
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| Protein sequence | MSNILESVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT SLPKLNSTVK
GVAHIRGNTI SVIDLSAATG GRPIENTEGC FIIIAEYNRS VQGFLVSSVE RIINMNWEAI
LPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TEISQETDEA ITIDREQHFH
IMVIDDSAVA RKQIIRALSS LGLQIDTAID GRDALDKLNK IAAEMDNVAT EIPLIISDIE
MPEMDGYTLT AEIRDNPKLK DIKVVLHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV
NKHLSL
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