| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3079 |
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| Symbol | flgJ |
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| ID | 5611627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3716891 |
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| End bp | 3717904 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934016 |
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| Product | flagellar rod assembly protein/muramidase FlgJ |
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| Protein accession | YP_001474811 |
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| Protein GI | 157376211 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC TGTCGAACTC ATCTCACTTT TTGGATATCG GAGGTCTGGA CTCTCTTAGA
TCGAAGGCCC AGAAAGATGA TAAGGGGGCG CTTAAAGAGG TGGCTCAGCA GTTTGAAGGG
ATATTTGTTC AGATGTTGAT GAAAAGTATG CGCGATGCCA ATGCGGTATT TGAATCTGAT
AGTCCGATGA ACAGCCAGTA CACCAAGTTT TATGAGCAGA TGCACGATCA ACAGATGTCT
GTGAACCTAT CGGATAAAGG CATGCTGGGA CTGGCAGATC TTATGGTTCA GCAACTTTCA
CCGGAAACCA GCAAGGTCAC TCCGGCTTCG GTGCTTCGTG GTGATATTGA ACAGGGTGGG
ATGGCTCAAG GAATGGTGAT GAGTCGTGCG GTCAGAACTG AGGCTACTCC TATTAATCCA
CCTGCGGATA GTCAGCTTGT TGACGCTAAA CCAAATAGTC CGCTTGAAAG CATATTAACA
GGCAAGAGTT TGCCGTCTGA AGTGACAAAG GCGGGAATGA CGTTTAGCGG TCCTGAAGAT
TTTGTTGCCA AGCTTTATCC TCACGCTGAA AAAGCCGCAG CCACATTGGG TACCAAACCT
GAAGTGCTTA TTGCGCAATC GGCATTAGAG ACTGGTTGGG GACAGAAGAT GGTAAAACGT
GCGGGTGGAG ATTCGAGTAA TAACCTTTTC AATATCAAGG CTGATAAACG CTGGCAGGGA
AGTAAGGCTA TGGTCAGTAC TCTTGAGTTT GAGCAAGGGG TTGCCGTCCA GCAAAAAGCC
GACTTCAGAG TCTATGACGA TATTAAGCAG AGCTTCGATG ATTTTGTCTC TTTCGTGTCG
GAAGGTCCAA GATACCAGGA GGCCATGAAG AAGGCAGCAA GTCCAAATGA ATTTATTCGA
GCGCTTCAGG ATGCGGGCTA TGCAACCGAT CCTCAATATG CCGATAAAGT GATAAAGGTG
ATGAAATCCA TTAGTCAGGA TCTCAAGGCA TCGATACCGG GAGTACAACC ATGA
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| Protein sequence | MEKLSNSSHF LDIGGLDSLR SKAQKDDKGA LKEVAQQFEG IFVQMLMKSM RDANAVFESD
SPMNSQYTKF YEQMHDQQMS VNLSDKGMLG LADLMVQQLS PETSKVTPAS VLRGDIEQGG
MAQGMVMSRA VRTEATPINP PADSQLVDAK PNSPLESILT GKSLPSEVTK AGMTFSGPED
FVAKLYPHAE KAAATLGTKP EVLIAQSALE TGWGQKMVKR AGGDSSNNLF NIKADKRWQG
SKAMVSTLEF EQGVAVQQKA DFRVYDDIKQ SFDDFVSFVS EGPRYQEAMK KAASPNEFIR
ALQDAGYATD PQYADKVIKV MKSISQDLKA SIPGVQP
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