Gene Ssed_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3074 
Symbol 
ID5611941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3711202 
End bp3711591 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content44% 
IMG OID640934011 
Productflagellar protein FlaG protein 
Protein accessionYP_001474806 
Protein GI157376206 
COG category[N] Cell motility 
COG ID[COG1334] Uncharacterized flagellar protein FlaG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA ATTTTGCAAG CTCATCCAGC GCGGCAGCGA CTAAGATAGA GATAGGGACT 
GGAGCTGCTA AAGCGGGAGT CGTAGAAGGT GCAGAGCTTG AGCCGAACAC TATAATTAAG
GCTGTAGAGG AAGTGGAAAA AAGTGCTTCT GAAGAACCCA AGTTAGATGA AAAAGAGTTA
CAGAGTTTAG TCGAAGACTT GTCCAGTATG ATGTCAGTTA TGCGTAAAGG GTTAGCATTT
AAAATCGATA AAGATTCTGG CACAAATGTT GTAAGTGTTA TGGACATCGA GTCCGGTGAT
CTGATTAGAC AGATCCCGAA CGAAGAAGCG TTAAAATTGG CGCGGAAGTT GACTGAAGTC
ACAGGTCTCC TTATGAAGAC AGAAGCCTGA
 
Protein sequence
MDINFASSSS AAATKIEIGT GAAKAGVVEG AELEPNTIIK AVEEVEKSAS EEPKLDEKEL 
QSLVEDLSSM MSVMRKGLAF KIDKDSGTNV VSVMDIESGD LIRQIPNEEA LKLARKLTEV
TGLLMKTEA