| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3057 |
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| Symbol | |
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| ID | 5612044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3693485 |
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| End bp | 3693862 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933994 |
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| Product | flagellar biosynthesis protein, FliO |
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| Protein accession | YP_001474789 |
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| Protein GI | 157376189 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3190] Flagellar biogenesis protein |
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| TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.190988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.139869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTATCT CAATGTTGGC GGCGGGTGCC GCTACGACTA CGGCAGCAGC CTCGGCGGTA
GAGAAAGACT CGGCAATGGC TACTTTAGCG AACATGTTGG GTGGTTTAAT TGTCGTACTT
ATCCTGATCT TCGTTTTGGC TTATATCGTG AGGCGGTTTA ATTTAGTCCC CGCAAGCAGC
AATGTGCTTA AAGTGGTTGC TGCAACGTCG TTAGGGCAGA GAGAGAAGGT GGTATTAGTC
GAGGTCGATG GTCAGCAATA TCTACTGGGC GTGACTCCTC AACAGGTTAA TTTAATAGAT
AAGCTGGAAA CTGTGGTAAA TACTGAGATG GATTCATTTG CCAGTCGATT ACTTCAAGCA
AAGTCAAAAC AATCATGA
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| Protein sequence | MIISMLAAGA ATTTAAASAV EKDSAMATLA NMLGGLIVVL ILIFVLAYIV RRFNLVPASS
NVLKVVAATS LGQREKVVLV EVDGQQYLLG VTPQQVNLID KLETVVNTEM DSFASRLLQA
KSKQS
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