| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2990 |
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| Symbol | |
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| ID | 5610502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3621605 |
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| End bp | 3622663 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640933930 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001474725 |
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| Protein GI | 157376125 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATAC TAATAACAGG TGGTGCAGGC TTTATTGGTT CTGCCGTGAT CCGTCATATT
ATCAATCACA CACAAGATAG TGTGGTTAAT CTTGATAAAC TGACCTATGC CGGTAACCTT
GAATCTCTTC AAGAAATTGA AAATAGTTCA CGCTATTGTT TTGAGCAGCT TGATATTTGT
GACTCTGTTG AGTTAAAGCG AGTTTTTGAG CAGCATAAAC CTGATTGTGT CATGCACTTG
GCTGCAGAAA GCCATGTTGA TCGCTCTATT GATGGACCAG CGGCATTCAT TGAAACGAAT
ATTGTAGGAA CGTATGCCCT CCTTGAGGCG ACGCGTGCTT ATTGGATTGC ATTAGATGAA
GATAAGAAAG CCGCATTCCG CTTTCATCAT ATTTCGACTG ATGAGGTATA CGGTGATCTT
GAAGGGACAG TCGATTTATT CACAGAAACA ACGCCTTATG AGCCCTCCAG TCCTTACTCT
GCTTCAAAAG CATCCAGTGA TCATTTAGTT AGAGCATGGC AACGTACTTA TGGGTTACCA
ACCATCGTTA CTAATTGTTC TAATAATTAT GGTCCTTATC ATTTCCCAGA AAAACTCATT
CCATTAATGA TTTTAAATGC CTTAGAGGGT AAACCTTTGC CTGTTTATGG TGATGGTATG
CAAATTCGTG ATTGGCTATA CGTTGAAGAT CATGCAAGGG CGCTTTATAA AGTCGTGACC
GAAGGGATGG TTGGCGAAAC TTATAATATT GGTGGTCATA ACGAAAAAGC GAACATAGAA
GTTGTGACGA CGCTATGTTC ACTTTTAGAG GAGTTGGTTC CAAACAAACC AGCAGGTGTC
TCGACTTACT CTGATTTAAT CTTGTTTGTG AAAGATCGCC CTGGTCATGA TGTTCGTTAT
GCGATTGATG CAAGTAAGAT TGAGCGAGAG CTAAGCTGGA AACCAGAAGA AACATTTGAG
AGCGGCATTC GTAAAACTGT ATTGTGGTAT TTAAATAATA AAGAGTGGTG GAGTCGTGTT
CTTGACGGCT CATATTCACG CGAAAGACTA GGTAATTAA
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| Protein sequence | MKILITGGAG FIGSAVIRHI INHTQDSVVN LDKLTYAGNL ESLQEIENSS RYCFEQLDIC
DSVELKRVFE QHKPDCVMHL AAESHVDRSI DGPAAFIETN IVGTYALLEA TRAYWIALDE
DKKAAFRFHH ISTDEVYGDL EGTVDLFTET TPYEPSSPYS ASKASSDHLV RAWQRTYGLP
TIVTNCSNNY GPYHFPEKLI PLMILNALEG KPLPVYGDGM QIRDWLYVED HARALYKVVT
EGMVGETYNI GGHNEKANIE VVTTLCSLLE ELVPNKPAGV STYSDLILFV KDRPGHDVRY
AIDASKIERE LSWKPEETFE SGIRKTVLWY LNNKEWWSRV LDGSYSRERL GN
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