| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2985 |
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| Symbol | |
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| ID | 5610525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3615084 |
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| End bp | 3615755 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933925 |
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| Product | adenylyl-sulfate kinase |
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| Protein accession | YP_001474720 |
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| Protein GI | 157376120 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0529] Adenylylsulfate kinase and related kinases |
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| TIGRFAM ID | [TIGR00455] adenylylsulfate kinase (apsK) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.879711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAAG AAAAATTTAA AGTTGTAGAT GTGGCGAATG AAAAGTCCTC TGATGTCGTC
TGGCATCAGG CGAGTGTGTC TCATGCTCAG CGTGAGGTGG CCAATGGTCA TGCTCCTGCG
GTACTCTGGT TTACAGGCTT GAGCGGTTCA GGAAAGTCGA CAGTCGCTAA TGCCGTCGAT
AAAATGCTGC ACGATTTAGG CTGTAAAACC TATGTGTTGG ACGGTGACAA TGTCCGTCAT
GGTCTAAATG GCGACCTTGG TTTTTCAGAT GCCGACAGGG TTGAGAATAT TCGCAGGATA
GGCGAAGTCT CTAAGTTGTT TGTCGATGCA GGTTTACTTG TCTCTACCGC CTTTATCTCA
CCCTTTGTCG AAGACAGAGA GAGCGTGCGT GCTTTGCTTA ATGACAGTCA GTATAGCAAT
AGTCAGCATA GCAATAGCCA GTTTATCGAA GTCTATATCG ACACACCCAT CGAAGTGTGT
GAACAGCGCG ACCCTAAAGG TCTGTATAAG AAGGCTCGAG CGGGCGAGAT AAAAAACTTT
ACCGGTATTG ATTCGGCCTA TGAACTGCCG ACCAGCCCTG AAGTGCATGT TAAGACAGCA
GTGCAATCTA TCGAAGAGTG TGCCCTGCAG GTAATCGATT ATTTGAAAGT GAGTGGATAT
ATAAAAGTGT AG
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| Protein sequence | MTQEKFKVVD VANEKSSDVV WHQASVSHAQ REVANGHAPA VLWFTGLSGS GKSTVANAVD
KMLHDLGCKT YVLDGDNVRH GLNGDLGFSD ADRVENIRRI GEVSKLFVDA GLLVSTAFIS
PFVEDRESVR ALLNDSQYSN SQHSNSQFIE VYIDTPIEVC EQRDPKGLYK KARAGEIKNF
TGIDSAYELP TSPEVHVKTA VQSIEECALQ VIDYLKVSGY IKV
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