| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2980 |
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| Symbol | |
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| ID | 5610556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3608807 |
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| End bp | 3609760 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933920 |
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| Product | cell wall biosynthesis glycosyltransferase-like protein |
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| Protein accession | YP_001474715 |
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| Protein GI | 157376115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.815971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT GTCAAAATCG TGACTCGGGA CGGGGATCTT GTAGCAGTAA AAATTTGGGC
AAAGAGTCTA TAAACTGTGA GACTTTGGAC CATGGCCCTA TGGTCAGTGT TTATATGCCG
ACTCATAACC GTGAACACTT ACTTAAGCGG GCAGTTGAGT CTGTACTTGC TCAAACTTAT
CAAAACTTCG AACTTATCAT CGTCGATGAC GGCTCCCGTG ATGGTTCGCC AGATTACCTG
CAGAGTCTGG CTAGCAGTGA GCCCAGAGTA CGTTTCTTTT GTCAGCCGAT AGCGCAGGGT
GCCTGCGCGG CGAGAAACAT TGCGATTAAA GAGGCTAAAG GCAAATACAT CACGGGTTTG
GATGATGATG ATGAATTTTT GCCAAACCGA CTGGAGCAGC TTTTATCATC CTATGACGAG
AAATATGCTT TCGTTTGCCA GGGAACATTT TGGCATTATG GCTCCCATAA AAAAGCATTA
GATGCTAATG CTATGATAAT CAATCTTTCA CAGATGTTAG ATTACAATTA CTCAACCAAT
CAAGTGCTTA CCGAAACAAA AAGGTTGCAA TCTATTGGTG GCTTTAACCC TGAATTTCCC
GCTTGTCAGG ATTACGATAC CTGGACCCGA TTGATATTAA AATACGGCGC AGCAAAACGA
ATTGCCGGTG CCAGCTATAT CATTCATCAG GGTCATGAAG GGCCGAGGAT TATCTCTAAA
TCTAATATGC AGAGAGGCTA TAAAAAATTC AGTGAGGAGT ATGGTTCTCT GATGTCTAAG
GGGAACCGGA TTAATCAAAA ATATTTAGCC TTAGTCTCTT CTCGCAAGCG TTTTAAGCTA
CTGGATTTTT TCCAGTCTGT CAGATATGGA CTCGTGGTTA AGAAGTGTCG CTATCTACTT
TCCAGCAACC TAAAATTGCT GTCAAAATTG AGAAGTAAAT GGTTGCGGGG TTAG
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| Protein sequence | MSDCQNRDSG RGSCSSKNLG KESINCETLD HGPMVSVYMP THNREHLLKR AVESVLAQTY
QNFELIIVDD GSRDGSPDYL QSLASSEPRV RFFCQPIAQG ACAARNIAIK EAKGKYITGL
DDDDEFLPNR LEQLLSSYDE KYAFVCQGTF WHYGSHKKAL DANAMIINLS QMLDYNYSTN
QVLTETKRLQ SIGGFNPEFP ACQDYDTWTR LILKYGAAKR IAGASYIIHQ GHEGPRIISK
SNMQRGYKKF SEEYGSLMSK GNRINQKYLA LVSSRKRFKL LDFFQSVRYG LVVKKCRYLL
SSNLKLLSKL RSKWLRG
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