Gene Ssed_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2958 
Symbol 
ID5610657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3583014 
End bp3583367 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content36% 
IMG OID640933898 
Producthypothetical protein 
Protein accessionYP_001474693 
Protein GI157376093 
COG category 
COG ID 
TIGRFAM ID[TIGR02436] conserved hypothetical protein TIGR02436 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATG AACAACTTGA AGTCTGGCAG CGTAGTTTTA AATTGAGCAT TAAAATCTAC 
CGCTTGTTTA CTAATTCTCG AGACTATGGG TTTAAGGATC AAATTTGTCG TTCGAGTATT
TCTGTACCTA GCAATATAGC TGAGGGAATG GAGCGTTGCT CTGACAAAGA AAAGGCAAGA
TTCTTGAGTA TCGCTAAAGG TTCTGTTAGG GAGTTAAAAA CGCAAGTAAT GATTGCTAAA
GAGATTGATT ATATTTCCGG TGATGAATGT TCTTCATTGT CAAATGAATG CGAACAAATT
AGCAAAATGC TTGGGAGTTT TATACGAACC TTGCGCACAA ATATTGAATA TTGA
 
Protein sequence
MKYEQLEVWQ RSFKLSIKIY RLFTNSRDYG FKDQICRSSI SVPSNIAEGM ERCSDKEKAR 
FLSIAKGSVR ELKTQVMIAK EIDYISGDEC SSLSNECEQI SKMLGSFIRT LRTNIEY