Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2958 |
Symbol | |
ID | 5610657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3583014 |
End bp | 3583367 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640933898 |
Product | hypothetical protein |
Protein accession | YP_001474693 |
Protein GI | 157376093 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02436] conserved hypothetical protein TIGR02436 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATG AACAACTTGA AGTCTGGCAG CGTAGTTTTA AATTGAGCAT TAAAATCTAC CGCTTGTTTA CTAATTCTCG AGACTATGGG TTTAAGGATC AAATTTGTCG TTCGAGTATT TCTGTACCTA GCAATATAGC TGAGGGAATG GAGCGTTGCT CTGACAAAGA AAAGGCAAGA TTCTTGAGTA TCGCTAAAGG TTCTGTTAGG GAGTTAAAAA CGCAAGTAAT GATTGCTAAA GAGATTGATT ATATTTCCGG TGATGAATGT TCTTCATTGT CAAATGAATG CGAACAAATT AGCAAAATGC TTGGGAGTTT TATACGAACC TTGCGCACAA ATATTGAATA TTGA
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Protein sequence | MKYEQLEVWQ RSFKLSIKIY RLFTNSRDYG FKDQICRSSI SVPSNIAEGM ERCSDKEKAR FLSIAKGSVR ELKTQVMIAK EIDYISGDEC SSLSNECEQI SKMLGSFIRT LRTNIEY
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