| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2939 |
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| Symbol | |
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| ID | 5610961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3556036 |
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| End bp | 3556776 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933879 |
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| Product | putative hydrolase |
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| Protein accession | YP_001474674 |
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| Protein GI | 157376074 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACC TTGTAGACAC TCATGCTCAC ACAATCGCCT CAACTCATGC CTATAGTACG
GTTCATGATT ACATCGCTGT GGCGAAGCAG AAAGGGCTCA AGTTATTTGC GATAACCGAT
CATGGTCCGG ATATGGCCGA CGCCCCCCAT TTCTGGCATT TTGTCAATTT AAGAGTGCTG
CCCAGAATTG TAGATGGCGT GGGGATATTA AGAGGTATCG AGGCTAACAT TAAGAATGAT
GCGGGAGAAA TAGACTACTT CGGGGATTAT CTGCAAGAGT TAGATATCGT GCTGGCAGGT
TTTCATGAAC CCGTTTTCCC ACCTTCAGAT AAACAGACTC ATACCCAGGC ACTGATCAAT
GCCATCGAGA GTGGTAATGT CGATATTATA ACTCATCCGG GCAACCCGGC TTACCCTATC
GATATCACGG CTGTAGCGGC GGCCGCGGCC AGATGCCATG TGGCACTCGA AATTAATAAC
TCATCGTTTG AAATGTCCCG AAAAGGCAGT GAGGCTAACT GTGTAGCAAT AGCTAAGGCC
GTTCGCGATG CGGGAGGGCA GTTAGTGATG GGCTCAGACT CTCATGTCGC ATTCAGTTTA
GGCGAGTTCT CACAGGCTCT GGCGATCATA GAGGAAGCGG AATTTCCCGA AGAGCGATTG
TTGAATAAAA GTCCGGAGGC GCTACTCACA TTTCTCTCTA AAAGAGGGCA CAAGACGCTG
GATGATTTTG CAGAGTTGTA A
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| Protein sequence | MKYLVDTHAH TIASTHAYST VHDYIAVAKQ KGLKLFAITD HGPDMADAPH FWHFVNLRVL
PRIVDGVGIL RGIEANIKND AGEIDYFGDY LQELDIVLAG FHEPVFPPSD KQTHTQALIN
AIESGNVDII THPGNPAYPI DITAVAAAAA RCHVALEINN SSFEMSRKGS EANCVAIAKA
VRDAGGQLVM GSDSHVAFSL GEFSQALAII EEAEFPEERL LNKSPEALLT FLSKRGHKTL
DDFAEL
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