| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2935 |
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| Symbol | |
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| ID | 5610905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3551442 |
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| End bp | 3552119 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933875 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474670 |
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| Protein GI | 157376070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00068648 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATATAC AAGTCGTACA AATTCGCTCG AGTACTAAGC GAAATGCTTT AACCTTAACA
TTTCTTGGGA TGTTGGGGCT GTTTCTCGGG TTTGGTATGT TTCTCTCTTC CTCCGGGTTA
TTTGCTCCCG GTATGCTCTG TTTTGCTTTG GGGGCGATAT CTGCAGTACT GGGGATATCT
AAGCTGATCG AGCCCGAGGT AAGTGTAGAG CTGAATCAAG AAGGGCTTTT TTACCATCAT
AGACGGGGGA GCCTGTTTAT TGGTTGGGAT AATGTTCAGC GTTTCGATAT TCCAAAGGGC
GTGGATGGCA TAGAGATGAT TGAGCTGCCC TTTATCGGAA TAAAGCTCAA ACAGATCAAT
CCGGTTTTAG ATATTATTCC CGGGCGACTC GCAACCGGGC TGCTTACAGA GCAGAGACCC
TTACTCATGT CGGCAGTCAC GTTAGATGAG AATCTGGAAG AGTTGGAGTC CTATATGAAC
TCTGAGTTTA CCCCCTTAGT CGTAAACGAA GAGCGTTATC GAGGTGTGCT GGCTATGTTC
GGTCATCGCT GTGAAATGCT CAGCAAAAAT TTAGGCTACC ATATCTACAT TCCTGTCGAT
TGTTTAGACA GAACATCGGA TGAGTTTGTT CGCTTACTTC GGGAGTATCT ATTGCGGGTT
CGGCAGGTTG GGGATTAG
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| Protein sequence | MNIQVVQIRS STKRNALTLT FLGMLGLFLG FGMFLSSSGL FAPGMLCFAL GAISAVLGIS
KLIEPEVSVE LNQEGLFYHH RRGSLFIGWD NVQRFDIPKG VDGIEMIELP FIGIKLKQIN
PVLDIIPGRL ATGLLTEQRP LLMSAVTLDE NLEELESYMN SEFTPLVVNE ERYRGVLAMF
GHRCEMLSKN LGYHIYIPVD CLDRTSDEFV RLLREYLLRV RQVGD
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