| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2844 |
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| Symbol | |
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| ID | 5610456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3441702 |
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| End bp | 3443012 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933763 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001474579 |
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| Protein GI | 157375979 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000693951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000285663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTTTAA CTCAAGCAAG AAAGCTCGGA TTGACGAGCA AAATCCTTAT CGGTATGGGA
GCCGGTATAC TTTTCGGACT ACTTCTTAGA AACCTATTTC CTGAAAGCAC ATTCATCGAA
AACTATGTCA CCGAGGGTTT CTTAAACGTT ATCGGGACGA TTTTCGTTTC AGGCCTGAAG
ATGATCGTCG TGCCTTTGGT ATTTATCTCC CTTGTCTGCG GAACCTGCTC ATTGAGCGAT
CCGTCCAAGT TGGGACGCTT AGGTGGTAAG ACTATCGCCT TCTATCTTTT CACCACGGCA
ATCGCCCTCT CTATGGCTAT CTCAGTTGCC ATTCTTGTTC ATCCGGGCAA CGCTTCTCTG
GTCAGCGATG GCTTAGTGTT TAACGCAAAA GAAGCCCCCA GCCTGTCTCA GGTTCTGATC
AACATAGTTC CGACCAACCC TCTGCAAGCC ATGAGTGAAG GCAATATGCT GCAGATCATC
CTCTTTGCGG TGATCTTCGG TTTTGCTATC TCTCATATCG GCGAACGGGG AAAACGTGTT
GCAGCGCTGT TCAATGACCT TAACGAAGTG ATCATGCGCG TAGTGACCCT TATTATGCAA
CTCGCCCCTT ATGGTGTCTT TGCATTGATG GCAAAACTCG CCCTGACATT AGGCTTAGAG
ACGTTTGGTA GTGTGGTTCA ATACTTCTTC GTGGTATTAG GCGTGTTATT GCTGCATGCC
TTCGTAGTCT ATCCATCCCT TTTGAAGATC ATTGCCGGAC TCAACCCATT CACCTTTATC
CGAAAGATGA GAGATGTTCA GCTGTTCGCC TTCAGTACCG CGAGTTCTAA CGCGACACTA
CCCGTCACGA TTGAAACTGC CGAGCACAGG TTAGGCGTCG ATAACAAGGT GGCTTCATTC
ACTCTGCCGT TGGGCGCAAC CATCAACATG GACGGCACGG CGATTATGCA GGGCGTTGCT
ACTGTCTTTA TCGCACAGGT CTATGGCATA GACCTTACTA TCACCGATTA CACCATGGTG
GTTGTTACAG CGACTCTGGC ATCAATCGGC ACGGCGGGGG TTCCGGGTGT AGGCCTTATC
ATGTTAGCCA TGGTACTGAA TCAGGTTGGG TTACCCGTCG AAGGCATTGC ATTGATCATC
GGTGTCGATA GATTACTGGA TATGGTGCGA ACGGCCGTCA ATGTCACCGG CGATACCGTG
GCTACCGTGG TTATTGCCAA ATCTGAAAAG GAGTTCAATG AGGTGACGTT CAATGACACT
CAAGCGGGTA AGGCCGCCAG CAGCTTCAAC GATCAGCTTA ATGCTAAATA A
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| Protein sequence | MALTQARKLG LTSKILIGMG AGILFGLLLR NLFPESTFIE NYVTEGFLNV IGTIFVSGLK
MIVVPLVFIS LVCGTCSLSD PSKLGRLGGK TIAFYLFTTA IALSMAISVA ILVHPGNASL
VSDGLVFNAK EAPSLSQVLI NIVPTNPLQA MSEGNMLQII LFAVIFGFAI SHIGERGKRV
AALFNDLNEV IMRVVTLIMQ LAPYGVFALM AKLALTLGLE TFGSVVQYFF VVLGVLLLHA
FVVYPSLLKI IAGLNPFTFI RKMRDVQLFA FSTASSNATL PVTIETAEHR LGVDNKVASF
TLPLGATINM DGTAIMQGVA TVFIAQVYGI DLTITDYTMV VVTATLASIG TAGVPGVGLI
MLAMVLNQVG LPVEGIALII GVDRLLDMVR TAVNVTGDTV ATVVIAKSEK EFNEVTFNDT
QAGKAASSFN DQLNAK
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