Gene Ssed_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2835 
Symbol 
ID5613539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3427828 
End bp3428103 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content45% 
IMG OID640933754 
Productacylphosphatase 
Protein accessionYP_001474570 
Protein GI157375970 
COG category[C] Energy production and conversion 
COG ID[COG1254] Acylphosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000760642 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000425949 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGAG TACTGATCAA TGTAAATGGC AAGGTACAAG GGGTATGTTT CAGACGGTTT 
GCGTTATCTA AAGCTCAAGA GTTGGGTTTG ACTGGCTATG TATCTAATAT CGAGGACGGT
TCGGTTAATA TCCTCGCTCA AGGGGCATTT CCGTCCGTAG ACTCTCTAAT CGATTGGTGT
CACATCGGCT CTCCACAAGC TCAGGTCACC AGAGTGCTTG TCGAAGAGGA TGAGGCCGAT
GAGATCTACC TCGACTTTTC GATTGTACAA TCTTAA
 
Protein sequence
MKRVLINVNG KVQGVCFRRF ALSKAQELGL TGYVSNIEDG SVNILAQGAF PSVDSLIDWC 
HIGSPQAQVT RVLVEEDEAD EIYLDFSIVQ S