Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2814 |
Symbol | sucA |
ID | 5613671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3396001 |
End bp | 3398823 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640933733 |
Product | 2-oxoglutarate dehydrogenase E1 component |
Protein accession | YP_001474549 |
Protein GI | 157375949 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCATCAC ACCTAAGTGG TGCTAATTCG ACCTATGTAG AAGAGATGTA TGAAGCCTAT CAAGAAGACC CTCAGTCTGT TTCCCAAGAC TGGCAAGTGG TGTTTGATAA CCTCCCTTAC GCGAATGGCA CGTCGAAAGA TGTGCCCGAA GCAGCTCACT CTAAAGTACG TGATTATTTT CGTAGTTTAG CGCTCGAAGG TCGTCAGACG GGCTCTGCCC GAGTGACAGA TCCGGAAGTT GATGCTAAGC AAGTTAAAGT CCTACAGATG ATCAACGCTC ATCGATTCCG TGGTCACCAG AATGCTAATT TAGATCCTCT GGAGCTTTGG AAGCGTGATC AGGTATCTGA ACTGGATCCA GCCTTCCATG GTTTAACTGG CGAAGATATG CTGCGTGAAT TCAATACGGG TTCATTTGCT CATGGTGGTG ATACCATGCA GCTTGGCGAA CTTGTTAAAG CCCTTAAAGC GACATATTGT GGCTCTATCG GTGCTGAATA CATGCACATT ACCGATACCG ATGAGAAACG CTGGATACAG CAAAGGTTAG AACCTTCTTT AGGTAGAGCT CATTACGACA AATCCATCAA AACACGTATC TTAGCCGGCT TAAATGCCGC CGAAGGTATG GAGAAATATC TGGGGGCTAA GTTCCCCGGT GCAAAACGTT TTTCACTGGA AGGTGGCGAT GCGTTAGTAC CTATGATGCG TGAGATTATC TATCGCGCAG GTGAAGCCGG AACTAAAGAA GTGGTTGTGG GTATGGCTCA CCGAGGCCGA CTGAACCTAC TTATCAACGT GTTAGGTAAA AAGCCTTCAG AATTGTTTGA TGAATTCGCG GGAAAACACA GTGATGAACT TAATGGTTCA GGCGATGTTA AATACCACCA AGGTTTCTCA TCAGACTTTG AAACGCCGGG CGGAAACGTT CACCTTGCAT TGGCGTTTAA CCCGTCGCAT CTGGAGATCG TCAACCCGGT TGTTATGGGC TCAGTTCGCG CTCGACTCGA TCGCCACGGC TGTGAAGAAG GCCTTAAAGT ATTACCAATC ACTATTCATG GTGATTCTGC CATTACCGGT CAAGGCATAG TACAAGAGAC ATTTAACATG TCTCAAACTC GTGGCTTCAA AGTGGGCGGA AGCATTCGAA TCGTAATTAA TAACCAAGTT GGTTTTACGA CTAACCTAAC CGAAGATGTG CGTTCGACAG AATACTGTAC CGATATCGCT AAGATGGTGC AGGCACCTAT CTTCCACGTT AATGCCGACG ATCCCGAAGC GGTTGCCTTC ATCTCTCAGC TTGCCGTCGA TTATCGAAAC GAATTTAAGC GTGATGTGGT TATCGATCTG GTTTGTTACC GCCGCCATGG TCATAACGAA GCGGATGAGC CCAGTGCGAC TCAACCATTG ATGTACGCTA AAATTAAGAA GCATCCTACG CCTCGTAAAA TTTATGCCGA TCGATTGATT GCCGAGCAGA CCTTAGGTGC CGATGACGTC ACCTCTATGG TCAACGATTA CCGAGATGCG CTGGATCACG GTGATTGTGT CGTGTCTGAA TGGCGTCCGA TGACATTGCA TTCGGTTGAC TGGTCTCCTT ATATCAACAG AGAGTGGGAT GAAGATTATC CGGCTCAGAT GTCGATGGAG AGAATCAAGA ATTTAGCCGA GAAGATCAGC TATGTTCCTG AAGGTCATAA GCTTCAGTCC CGTGTAGCCA AGATCTACAA AGATCGAGCC TTGATGGCTA GTGGTGAAAA ACTCCTCGAT TGGGGTTTTG CCGAGACTCT GGCTTACGCG TCGATTGTTG AAGATAAGAA ACGTATTCGT ATTACCGGTC AGGATTCCGG TCGTGGTACC TTCTTCCATC GTCATGCGGT TCTGCATAAT CAAAATGATG CGACGGCATA TTTGCCACTT CGCAACATTG CCGATGAGCA GGGTCCCATC GATATTACTG ACTCAGTCCT GTCTGAAGCC TCTGTATTGG CGTTCGAATA TGGTTACGCT ACCGCAGAGC CAGGTGGATT AACACTTTGG GAAGCGCAAT TTGGTGACTT TGCCAACTGT GCTCAAGTGG TTATCGATCA GTTCCTGTCA TCGGGTGAGC AGAAGTGGGG CCGTTTATGT GGTCTGACTA TGTTACTGCC TCATGGCTAC GAAGGTCAGG GACCGGAGCA CTCGAGTGCC CGACTGGAGC GATTCCTACA GCTTTGTGCT AATCACAACA TGCAAGTCTG TGTGCCTTCT ACTCCGGCGC AGGTTTACCA TATGTTGCGT CGTCAGGTTG TCAGGCCTAT GCGACGTCCG CTCGTTGTGA TGTCTCCTAA GTCACTGCTA CGTCATCCAT TGGCGGTATC TAGCATGGAA GAGCTTGCCG AAGGCAGCTT CCAGAACATC ATCCCTGAGA TGGAAAGCTT AGATAATACA AACGTTGACC GTGTGGTTTT CTGTAGTGGT AAAGTTTACT TCGAACTATT AGAAAAGCGT CGCAAAGAGA ATGTGACTAA TGTCGCCCTT GTTCGTGTGG AGCAGTTATA TCCGTTCCCT CATGAAGATA TGGAGACGAT TTTAGCCGAT TATCAGCACG TCAAAGATTT TGTCTGGTGC CAGGAAGAGC CTCAAAACCA AGGCGCCTGG TACTGCAGTC AGCATCATTT CTGGAGCTCA ATTCCAGCAG GTGCCCAGCT AACTTATGCC GGACGTGAAG CATCTGCTGC ACCGGCCTGT GGTTACCCGG CATTGCATGC TCAGCAACAA GAGTCTTTGA TTAATAGCGC ATTAAAACTG TAG
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Protein sequence | MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QEDPQSVSQD WQVVFDNLPY ANGTSKDVPE AAHSKVRDYF RSLALEGRQT GSARVTDPEV DAKQVKVLQM INAHRFRGHQ NANLDPLELW KRDQVSELDP AFHGLTGEDM LREFNTGSFA HGGDTMQLGE LVKALKATYC GSIGAEYMHI TDTDEKRWIQ QRLEPSLGRA HYDKSIKTRI LAGLNAAEGM EKYLGAKFPG AKRFSLEGGD ALVPMMREII YRAGEAGTKE VVVGMAHRGR LNLLINVLGK KPSELFDEFA GKHSDELNGS GDVKYHQGFS SDFETPGGNV HLALAFNPSH LEIVNPVVMG SVRARLDRHG CEEGLKVLPI TIHGDSAITG QGIVQETFNM SQTRGFKVGG SIRIVINNQV GFTTNLTEDV RSTEYCTDIA KMVQAPIFHV NADDPEAVAF ISQLAVDYRN EFKRDVVIDL VCYRRHGHNE ADEPSATQPL MYAKIKKHPT PRKIYADRLI AEQTLGADDV TSMVNDYRDA LDHGDCVVSE WRPMTLHSVD WSPYINREWD EDYPAQMSME RIKNLAEKIS YVPEGHKLQS RVAKIYKDRA LMASGEKLLD WGFAETLAYA SIVEDKKRIR ITGQDSGRGT FFHRHAVLHN QNDATAYLPL RNIADEQGPI DITDSVLSEA SVLAFEYGYA TAEPGGLTLW EAQFGDFANC AQVVIDQFLS SGEQKWGRLC GLTMLLPHGY EGQGPEHSSA RLERFLQLCA NHNMQVCVPS TPAQVYHMLR RQVVRPMRRP LVVMSPKSLL RHPLAVSSME ELAEGSFQNI IPEMESLDNT NVDRVVFCSG KVYFELLEKR RKENVTNVAL VRVEQLYPFP HEDMETILAD YQHVKDFVWC QEEPQNQGAW YCSQHHFWSS IPAGAQLTYA GREASAAPAC GYPALHAQQQ ESLINSALKL
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