Gene Ssed_2761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2761 
Symbol 
ID5612010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3328516 
End bp3328947 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID640933680 
Producthypothetical protein 
Protein accessionYP_001474496 
Protein GI157375896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.264134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.221278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGAA CTTGCTACAA CAAAATAGAG ATAAAATCCC CAATCAAAAC AGTATGGAAA 
ACGATCTGCG ATTTTCATGA TATGTCCTGG GCCCCACAGG TTATTACCTC AGTGGCTAAA
GTTGGCGATA AAAATGGAGA TGAAGTAGGC GCAAAAAGAG TGCTGAATGA GTTGTTTCAT
GAAACTTTAC TCAGTCTCGA TGCCGATGCA TTTACTTTTT CTTACAGTAT CGATGATGGA
CCAGGCCCAG TATCCAGCTC TGCGGTGAAT AACTATGTCG GTGTTGTGAA ACTCACCGAG
TCCGAACAAG GCACGCAGGT TGAGTGGAGC TCGACCTACG AGTCTGAAAA TGAAAATGAG
GTCGCCGATT TCTGTAACCC TATTTATGGG GCGCTACTGG CAGGACTTAA AGACACCTTA
TCGTCCAGTT GA
 
Protein sequence
MMGTCYNKIE IKSPIKTVWK TICDFHDMSW APQVITSVAK VGDKNGDEVG AKRVLNELFH 
ETLLSLDADA FTFSYSIDDG PGPVSSSAVN NYVGVVKLTE SEQGTQVEWS STYESENENE
VADFCNPIYG ALLAGLKDTL SSS