Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2761 |
Symbol | |
ID | 5612010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3328516 |
End bp | 3328947 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640933680 |
Product | hypothetical protein |
Protein accession | YP_001474496 |
Protein GI | 157375896 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.264134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.221278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGAA CTTGCTACAA CAAAATAGAG ATAAAATCCC CAATCAAAAC AGTATGGAAA ACGATCTGCG ATTTTCATGA TATGTCCTGG GCCCCACAGG TTATTACCTC AGTGGCTAAA GTTGGCGATA AAAATGGAGA TGAAGTAGGC GCAAAAAGAG TGCTGAATGA GTTGTTTCAT GAAACTTTAC TCAGTCTCGA TGCCGATGCA TTTACTTTTT CTTACAGTAT CGATGATGGA CCAGGCCCAG TATCCAGCTC TGCGGTGAAT AACTATGTCG GTGTTGTGAA ACTCACCGAG TCCGAACAAG GCACGCAGGT TGAGTGGAGC TCGACCTACG AGTCTGAAAA TGAAAATGAG GTCGCCGATT TCTGTAACCC TATTTATGGG GCGCTACTGG CAGGACTTAA AGACACCTTA TCGTCCAGTT GA
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Protein sequence | MMGTCYNKIE IKSPIKTVWK TICDFHDMSW APQVITSVAK VGDKNGDEVG AKRVLNELFH ETLLSLDADA FTFSYSIDDG PGPVSSSAVN NYVGVVKLTE SEQGTQVEWS STYESENENE VADFCNPIYG ALLAGLKDTL SSS
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