Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2702 |
Symbol | |
ID | 5612809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3267500 |
End bp | 3267922 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640933621 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001474437 |
Protein GI | 157375837 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.651108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTTTC AAGTGATCAA TGAAGAAGAT CCCGTACTGG TGAATGAACT GGTTGACGGC GTGCGGGTGC ATGTCCATGA ACAGTTGGGG GATGAATTAA CGCTCCCGCT GTCGGTCATC AGTCGGGATG ATAATGGAGA ATTAATCGGA GGAGTTTCCG GGCGGACCAT TTACAGAAAC TTCTTAATTG GGGTGGTTTG GGTCGATAAA AAATACAGAG GCACAGGACT GGGGCGTCAG CTGATGGAGT TAGCCGAAGA CGAGGCAATA GGGCGAGGCT GCTTAGTTTC CCAGGTGGAT ACCTTGTCAA TCCAGGCACC GGTGTTTTAT CAAAAACTTG GGTTTGAGAT TATCGGCTCA GTACCTGAGT TCCCGGGAAG CCCTGCGCGC TACTTTCTGA TGAAAACCTA TGGTGAGACA TAA
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Protein sequence | MKFQVINEED PVLVNELVDG VRVHVHEQLG DELTLPLSVI SRDDNGELIG GVSGRTIYRN FLIGVVWVDK KYRGTGLGRQ LMELAEDEAI GRGCLVSQVD TLSIQAPVFY QKLGFEIIGS VPEFPGSPAR YFLMKTYGET
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