| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2678 |
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| Symbol | |
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| ID | 5612243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3234891 |
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| End bp | 3235829 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933597 |
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| Product | response regulator receiver modulated CheW protein |
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| Protein accession | YP_001474413 |
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| Protein GI | 157375813 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0835] Chemotaxis signal transduction protein
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0199239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.361965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAA TTCTTGATTC GGTTGATCAA CGTACAAAAC TCGTTGGTGA AAATAGGTTA
GAGCTTTTAT TGTTTCGAAT AAATGCCACT CAACTTTTTG CAATTAACGT TTTTAAAGTC
AAAGAGGTGG TTAAACTCCC TGCATTAAGC GCTGTGCCGG GCAGTCATCC CCATATCAGT
GGGGTTGCCA ATATTCGAGG CACCTCCATT CCGGTTATCG ATCTGCGTGC GGCTATCGGT
TTTCAACCTA TGTCAGACGA TCAAGAGTCA AACTTGATTA TTACCGAGTA CAATCGAAGT
GTACAAGGCT TTAGAGTTGG AAAGGTCGAG CATATTGTCA ACATGACTTG GGGGGATATC
TTACCTCCAC CTAAGACCGC AGGAAGTAAT AATTACTTAA CCGCCATAAC TCGCATCGAA
ACGGAAGGTA ATACCCAGTT AGTCTCAATT ATTGATGTTG AAAAAGTGCT GGCGGAGATC
ATTCATTATG ATATTCGTCT CTCTGAAGGG GTTCTCGATG AATCACTGGT CAGCGAGATG
CATGGTCGCA GAATATTGAT CGCCGATGAC TCGTCTACCG CTCGTAGACA GATTAAAGAG
ACATTAGAGC CTTTAGGGAT AGAGATCTTA GAAACTTCAG ACGGGTTGCA GGCTTTGAAT
GTCTTGAAAA AGTGGTGCGA TGAGGGGAAA TCTGTTCAGG ATGAGATCTT AATGTTGATC
ACAGATGCCG AGATGCCCGA GATGGATGGC TATAAACTGA CTCATGAGAT CCGTAGTGAT
AAACGTATGA GCGATCTGTT TATTACCTTG AATACTTCAT TGAGTGGCAG TTTTAACAAG
GCCATGGTCG AAAAAGTCGG TTGTGACCGA TTCATATCTA AATTCCAACC CGATCTACTC
GTGGATGTGG TGCAACAGAA GTTAAGAGAG ATAGTTTAA
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| Protein sequence | MAKILDSVDQ RTKLVGENRL ELLLFRINAT QLFAINVFKV KEVVKLPALS AVPGSHPHIS
GVANIRGTSI PVIDLRAAIG FQPMSDDQES NLIITEYNRS VQGFRVGKVE HIVNMTWGDI
LPPPKTAGSN NYLTAITRIE TEGNTQLVSI IDVEKVLAEI IHYDIRLSEG VLDESLVSEM
HGRRILIADD SSTARRQIKE TLEPLGIEIL ETSDGLQALN VLKKWCDEGK SVQDEILMLI
TDAEMPEMDG YKLTHEIRSD KRMSDLFITL NTSLSGSFNK AMVEKVGCDR FISKFQPDLL
VDVVQQKLRE IV
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