| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2654 |
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| Symbol | |
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| ID | 5612599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3209934 |
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| End bp | 3211517 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933573 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474389 |
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| Protein GI | 157375789 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.481724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.288172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT CGGGAATGAA AAAATCGATT ATTGCTTTAA CTATTATGAC TGTTGTCTCT
ACCTCTGCTT TCGCTGAAAC GGCGAGTTCT GTAGAAGTCC CAGAATGGCT GCAAAAGAAA
ATCATGAACA ATTCTACTCG TAGCATGAAA AACGAGGATA TGGTTTTTGC TCATGAGACT
ATGATCCGTG ACAATGCTAG TGATGTTAAG AATAACGGCG TCAACATTAA TAATCTGACA
GATAGTCAAG CTAAGCTACG CGCTGATGGA AAAGCTAATA AAGTTGATAT TGGTCGCATT
GATAAAACTA TTGGTGATTG GGAAGATCCT AAGTGGGAAA ATCGCTCGAT GACTGAGGTC
ATTACTGAGA ATTCTAATCT AATTGAAACA AACCAAGCAT CTATTGGTGG TGAAAGACAG
CTTGCGGATA TGGTCAGATT AACGGGCTCA GAAACACTTG CACAGGGGGT AATTAATAAC
TTCGAAGCAA ACGAAAGTCT ACGTAAGGAA GGTGTCGATG AGGCTGCTCG ATTAGATGAG
CGTATCGAGA AGATCAATGA ATCTGGATAC GATGATGCTC AGATCCGCGC AGATGGCGAA
AAGGCCATTA ATGCTAGTAA CTCTGAAATT AACCACAACC GCTACAATAT CGTAGAGAAC
CAGAAAGAGA TTGTTGATCT GACAGGTGCT CAAGCCCTGC TACGCAGTGA TGGCGAAAAG
GCTATTGAAG CGGGTAAAGA ATATATTGAT GACCGTATCG AGAAGATCAA TAAATCTGGA
TACGATGACA CTCAGATCCG TGAAGAAGGC AGAGCTGATT CTGCTCGTCT TGATAAGCGT
ATCGATGAAG TCGCTAGTAA AGGATATGAC GATAGCGTGA TCCGCAACGA TGCAGATAAA
GCGCTAACCA GTCTAAGCCA AGATGTTGAC TCTCGTTTGA ACAGTGCTGT CTCTCAAGGT
GGCGAAGAGG TCGCACTTTT AAACAAGCGT ATCGATGAAG TTCAAAGCAA TGGCGGCAAT
CCGATCACCG AAGAAGATAT CGAGGCCGCT CGAAAAGAAG CTAAGGACAT AGCGAACAAG
GCAGTTGAAG ACGCAGCAGC AAGTATTGAT ACCGCCGCAC TTGAAAAAGC TATTGAAGGT
AAGATCGATG ACGCAATTAG CAAGATCGAC ACTGACGCCG CACTTAAGAA ATTCAAAGAA
GAACTTGATA ACTACGACCG AGAAATCCGT GGAGATGGAG CTAAACAAGT CGCAAGGCTA
GATAAGCGCA TCGATGCGAA CGCTGAAAAA ATCGACCAAA ACAGCAAGAA GATTGAAGCC
CTTGAGAATC GTATTGACGG CTTCCAAGAC TACATGAATG AGAATGCCGC CATGACTAAC
GCACTGTCTG GTTTACCGCA GCCTTACAAT GTTGGAAAAA TGCAGGTTGG TGTTGGTCTT
GGTTTCGCAA GTGACAAGAA AGCGGTAGCG GTTGGTTTCG GCTACCGAGC TACTGAGGCC
GTTGTTATCC GTGGCGGTGT TTCTAAGTCT GCAGGCGACC GTGGCGATGT CCAAGGTAAC
ATCGCAGTTG GTTATGAATT CTAA
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| Protein sequence | MENSGMKKSI IALTIMTVVS TSAFAETASS VEVPEWLQKK IMNNSTRSMK NEDMVFAHET
MIRDNASDVK NNGVNINNLT DSQAKLRADG KANKVDIGRI DKTIGDWEDP KWENRSMTEV
ITENSNLIET NQASIGGERQ LADMVRLTGS ETLAQGVINN FEANESLRKE GVDEAARLDE
RIEKINESGY DDAQIRADGE KAINASNSEI NHNRYNIVEN QKEIVDLTGA QALLRSDGEK
AIEAGKEYID DRIEKINKSG YDDTQIREEG RADSARLDKR IDEVASKGYD DSVIRNDADK
ALTSLSQDVD SRLNSAVSQG GEEVALLNKR IDEVQSNGGN PITEEDIEAA RKEAKDIANK
AVEDAAASID TAALEKAIEG KIDDAISKID TDAALKKFKE ELDNYDREIR GDGAKQVARL
DKRIDANAEK IDQNSKKIEA LENRIDGFQD YMNENAAMTN ALSGLPQPYN VGKMQVGVGL
GFASDKKAVA VGFGYRATEA VVIRGGVSKS AGDRGDVQGN IAVGYEF
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