Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2596 |
Symbol | ihfA |
ID | 5613450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3146166 |
End bp | 3146462 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933515 |
Product | integration host factor subunit alpha |
Protein accession | YP_001474331 |
Protein GI | 157375731 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.184859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACTTA CCAAAGCCGA AATGGCAGAG CATCTTTTTG AAACGCTAGG AATTAACAAG CGTGTAGCTA AGGAGATGGT AGAGACGTTT TTCGAAGAAA TTCGTCAAGC ACTCGAAAGT GGTGAGCAGG TCAAGTTATC TGGCTTTGGC AACTTTGACC TTAGAGATAA GAATCAAAGA CCGGGAAGGA ACCCGAAAAC AGGCGAAGAT ATCCCTATCT CAGCTCGCCG AGTCGTAACT TTCCGACCTG GACAAAAGCT TAAGAGCCGA GTCGAAGAGG CAAACGCGAA AAAATAA
|
Protein sequence | MALTKAEMAE HLFETLGINK RVAKEMVETF FEEIRQALES GEQVKLSGFG NFDLRDKNQR PGRNPKTGED IPISARRVVT FRPGQKLKSR VEEANAKK
|
| |