| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2554 |
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| Symbol | |
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| ID | 5610084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3098020 |
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| End bp | 3102111 |
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| Gene Length | 4092 bp |
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| Protein Length | 1363 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640933473 |
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| Product | proprotein convertase, P |
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| Protein accession | YP_001474289 |
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| Protein GI | 157375689 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA CTAAATATAT ATTAGTAGCA ATATTACTTT TATTGCCTTT CCTATCTGAG
GCCGCGACGC CGTTGCAACA GTTGCGTATA AACAAAGACG CGACGGTGCT AAATGGCGAG
TTCAGTACCT CATTTGATGT ACCTAAAAGC GAAAGCATTA CTGTGATCAT TCCCAATGTT
GAGGGCTTTC AAACCAGCGC TATTAGCCTT ATTAGCCCTG ATAATGAAGT GATCACTGAA
AATAATGCTG CTTTATATGG TGTCGATATA ATAGAGTTCG CACCGGTAAC CAGTGAAGAG
CATTTTATCG CGTTAACCAA CAGTTGGATT GTTGAAATAA CAGATGCCAA GGCGGGTCAA
TATACCATAA AAGGCTTGAC CACATCCGCA CACCCCAAAA TACCGGTAAG CGTTCAGGTT
AATGATTCGA ATATATTGTT TCATTTAACG ATAGGCGAGT CTTCAGTTAA TACAATGGTT
AACCGCTTTA TGCCGATTTC AGTTTTTTTA GCTGAAAGTG GATTGCCCCA TACTCAAGGA
AGGGTGACTA TTGAGATATC GAAGGATGGA GTTATCCTTC AGCAAGTGAC AACTCATGAT
GACGGTACTG CCTCGGACTA TTCGGCGAAT GATGGTTTGT ACTCGACGTT ATTTAAACCT
TTATCCACGG GTATATATAA TTTGTCTGTG CATATTACAG GAATCAATAG AAATGGAGAG
AAATTTGAGG CTAGCCTTTC ATCTAGGTTC AAAGTGAATA TTGAAAATAT CTACATCACC
GACACATATT CTGAAGATGT GTCAGATAAA GATGGTGATG GATATAGTGA TGCGTTGATT
TTAAACTTTG AAACAGGGGG AGAGTTTCCA GCTACCGGCC GTTTTACTTA TAGCGTTACG
TTGGGGCTTG GTGATGAAGG TAATTTAGTT CATTACGGCA GTATTGATGC GTCAGAAAAG
AAAATTTATG CCAAAATTGA TGGAAAAAAA ATTCGGAGCT TTAATTACTC TGGAGAGTTT
AAAATTAAAA ATTTGGCAAT CGAATATGGT GACCAGTATA TTCAATGGAG TGGTTCGCTA
GCTAATACCG CATTTTATGA TAATGACTCT TGGGAACGTG ATGATTTACT CTATCTAGGC
AATGTGACTT TCGACCACAT CGACAGCGCA GATAATCGTT TCATTGATAT GATAGACGTG
TCCTTCGATG TTGATTCACT GCCGGCTGAA AAATTTGGAT ACTCTACAAT AGTCACTACG
GTGAGCGGTG AACATGTCGG TGCCTACGGA GAACCAAGCA TTGATTTAAG CCAAGGGATT
AACACTGTAA CATTTTCTAT CCCAGCATCT GATTTTTCAA AACTACAATC AAATACAGCA
TTAAAGATAA AAAATTTATT GATGTACCCC CTGATAAAGG GGGGCAATGT CATATCGAAA
AAGAATGTGG CCACCAGTTT GTCATATTCG TGTTGGGATT TTTCAGGTTG CTCAGCGGCT
GACAATGCGA TTCCGGTTGC AGTAGACGAT GAAGTTACTT CTCTTGGAAA GGCGATGTAC
ATAAATGTTG CTCAAAATGA CCTTGATGAT GACGGTGATC TGCTCAAGGT CAATTCAGTC
ACTTCCGCTC AACATGGGGT CGCTGAAGTA GTGGGTAATG CCATTCAATA TACACCAACG
ATAGATTTTG AAGGTGAAGA TGTTTTCCAA TATGAGCTAA TTGACCTTCA TCCAAAAAAT
AATATTTGGA AGGGCGGTTC AGCACTAGGT ACGGTACGCG TATTAGTGAA ACCCAACCAT
GAACCCGTCG CGAATGCAGA TGCTTATCAT GTTCCTGAAG GCATCACGAC CTATTTTAAA
GTCTTGGACA ATGATTTAGA CATAGATGGA GACGGATTAT ATATTTCATC TTACTCTGAG
GCGATGCATG GAACCATTAC CAATTATGGT AATCAATTGG GGTATACACC AGTTCAGGGC
TATGTTGGTG CTGATAGCTT TACATATACA ATTATGGACT TTGATGTAGC TACTAATGTG
ACTAAAGGTG GATCGGCGAC TTCGCAGGTA TCTATTGAGG TTGGAAATCT TATTAATGAT
GATCCTATTG CGATGAATGA TAGCTATTCA TTAACACCAG GCACCCAATC CACACTAGAT
GTATTGCAGA ATGATTCGGA TTTGGACAAT GATTCTCTGA GAATAAGCGT TTACTCCTTA
CCCGCTAAAG GGACAATAGA TGTTACTGAT AAACTCATTA CCTATAATGC CAATATTGAT
GCCAATGGCA CTGATTCGTT CGCCTATTCT ATTACGGACG GTAAAGGAGG GAGTGCGACT
GCTATTGTTA CGATTACCTT TGTTCTCGAA AATAATCCTG CTGTAGCCGT TAATGATAAT
GTTGAGGTAC CAAAGAATAC TTCACTAGCT ATCAATGTTC TTAGTAATGA TTACGACGTA
GAGGGCGATA GTTACAGCAT CGTCCGTTTC ACCCAGCCTT TCAACGGTTC AGTCGTCAGA
GGTTTAGGAG ATGAGCTGAT CTACACACCG GAGACTGACT TCATTGGAGA TGAGGGTTTT
AGCTATACTA TCCAAGACGT TCAGGGAAAC CTTTCGACTG CCCTAGTGCA CTTAACCGTT
TTAAATGATG AACCACTCGT CATCGCTAAT GACGACACAG TGAAATTGTT TATTAACACA
TCCGTTGAAA TTGATGTGTT GAGTAACGAT ACTATCGAGT CTACGGGGTC GTTAAGCATT
GCTAGCTTTT CACAGCCCGA AAATGGATTA GTAAATCTGT CAAATGGTAA GTTCACCTAT
ATTCCTAACA CTGATTTTCA TGGTACAGAT GAGTTTACTT ATTCGATTAG CGACAATTTG
GGAAACTCGG ATGTAGCTGC TGTATTTATC TCTGTCGACA CAGTTAACTC TTCACCAACA
GCCGTTAAGG ATGTTGCATT TACACAGCTA AATGTTGGTG TGAGCATCGA TGTGTTGTCA
AATGACTATG ATGTGGATAA TGAATCTATT GAATTAATTA GTTTTGAGCA GGGGCAATAC
GGTAGCACAG AGTTGTCTGG GAACAATATA GTCTATCAAC CCAAAGATGA TTTTGTTGGT
GAGGATGCAT TTACTTATCT AATTTCCGAT CCATCAGGTG CGGAGTCGGA AGGATTTGTG
ACTGTAAGTG TCCTTGATAA TAATGAAGCT CCTTTAGCCC AAGATGATTC TACTGAGGTG
TACCAAGGTA GGAGTATTAT TGTCGATGTC CTTTTGAATG ATGTTGACCC AAATGATGAT
CTTTTGTTTA TCACTTCAAT TTCTGAGCCT TCAAATGGTA GTGCCGTAAT TGAGAACAAT
AAAATAAAAT ATACGGCTCC TTTTGATTTT GTCGAAAATG TTGAGGTTAT ATATATAGTT
TCAGATGGAA AATTGACCTC GTCAGCCAGT CTAATGATTT CGGTGCAGCC TACTGTCAAC
ACTGCACCAA GTGTTGAAAT TGTGAATCCG GTAGATGAAC AACGTTTTAC ATTTGGTTCT
TTAATTCACC TTACCGGTAA AGCATGGGAT GAAGAGGATG GCGAGCTAAG CGATAAAATT
TCATGGGGTT CGAATATCGA TGGAGAGCTA GGCGTAGGGG GTGAAAAAGA TGTGTTACTG
TCACCTGGCC AACATACAAT AACAGCGACC ATCATTGACA ACCAGCAGAA TACATCTTCC
ACGTCGGTGA CTATTTTTAT AGAGGAGTTA TCCGGACAAA CATATTCCAA CAATACTGAA
TACAACATAC CAGATAATAG AGGTTATGGT GTGACGTCGA ACATTACAGT ACCCGTTGAT
ATATATTCAA CAACCATCAC TGTCACAGCT AGGATATCAC ATCCAATGTT AGCTGATATT
GCGGTTCAAT TAATATCACC AACAGGTAAG CATTATAATT TGGTGAACCC GGGCAAGTAT
ATATCTAATG AGAATTGGCA TATAGACTTA AGACAAGTTG AAACAGCTAA AGGCGTTTGG
GCGCTCAAGA TCAGCGATCA AAAAAGAGAA AATATTGGCA CATTAAAACA ATGGAGGATT
CAGTTTGATT AA
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| Protein sequence | MKITKYILVA ILLLLPFLSE AATPLQQLRI NKDATVLNGE FSTSFDVPKS ESITVIIPNV
EGFQTSAISL ISPDNEVITE NNAALYGVDI IEFAPVTSEE HFIALTNSWI VEITDAKAGQ
YTIKGLTTSA HPKIPVSVQV NDSNILFHLT IGESSVNTMV NRFMPISVFL AESGLPHTQG
RVTIEISKDG VILQQVTTHD DGTASDYSAN DGLYSTLFKP LSTGIYNLSV HITGINRNGE
KFEASLSSRF KVNIENIYIT DTYSEDVSDK DGDGYSDALI LNFETGGEFP ATGRFTYSVT
LGLGDEGNLV HYGSIDASEK KIYAKIDGKK IRSFNYSGEF KIKNLAIEYG DQYIQWSGSL
ANTAFYDNDS WERDDLLYLG NVTFDHIDSA DNRFIDMIDV SFDVDSLPAE KFGYSTIVTT
VSGEHVGAYG EPSIDLSQGI NTVTFSIPAS DFSKLQSNTA LKIKNLLMYP LIKGGNVISK
KNVATSLSYS CWDFSGCSAA DNAIPVAVDD EVTSLGKAMY INVAQNDLDD DGDLLKVNSV
TSAQHGVAEV VGNAIQYTPT IDFEGEDVFQ YELIDLHPKN NIWKGGSALG TVRVLVKPNH
EPVANADAYH VPEGITTYFK VLDNDLDIDG DGLYISSYSE AMHGTITNYG NQLGYTPVQG
YVGADSFTYT IMDFDVATNV TKGGSATSQV SIEVGNLIND DPIAMNDSYS LTPGTQSTLD
VLQNDSDLDN DSLRISVYSL PAKGTIDVTD KLITYNANID ANGTDSFAYS ITDGKGGSAT
AIVTITFVLE NNPAVAVNDN VEVPKNTSLA INVLSNDYDV EGDSYSIVRF TQPFNGSVVR
GLGDELIYTP ETDFIGDEGF SYTIQDVQGN LSTALVHLTV LNDEPLVIAN DDTVKLFINT
SVEIDVLSND TIESTGSLSI ASFSQPENGL VNLSNGKFTY IPNTDFHGTD EFTYSISDNL
GNSDVAAVFI SVDTVNSSPT AVKDVAFTQL NVGVSIDVLS NDYDVDNESI ELISFEQGQY
GSTELSGNNI VYQPKDDFVG EDAFTYLISD PSGAESEGFV TVSVLDNNEA PLAQDDSTEV
YQGRSIIVDV LLNDVDPNDD LLFITSISEP SNGSAVIENN KIKYTAPFDF VENVEVIYIV
SDGKLTSSAS LMISVQPTVN TAPSVEIVNP VDEQRFTFGS LIHLTGKAWD EEDGELSDKI
SWGSNIDGEL GVGGEKDVLL SPGQHTITAT IIDNQQNTSS TSVTIFIEEL SGQTYSNNTE
YNIPDNRGYG VTSNITVPVD IYSTTITVTA RISHPMLADI AVQLISPTGK HYNLVNPGKY
ISNENWHIDL RQVETAKGVW ALKISDQKRE NIGTLKQWRI QFD
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