| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2540 |
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| Symbol | |
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| ID | 5612962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3085497 |
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| End bp | 3085841 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933459 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474275 |
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| Protein GI | 157375675 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4392] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.137358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCACG TTCACATTCA ATTAGATATG ACCACCTTCT TGCTCATCAC CATAGCGATG
GTCGTAGCAA CATTTATCAT ACGTTTCTCG GTTATCTGTA TGGCGGGCTC ATTTGAGATG
CCGGAAAGGT TAAAGAAGAC CTTAAGGTTT GTACCTGTAA CTGTGCTTCC GGCCATTATC
GCAGTAGAGA TCTTGGGCTC TGGCTCAAAC ATGGAATTTA ACCTACATAA CCCTAAGGTA
CTTGCCGCCA TAGTCTGCAC TTTAGTCAGT CTGCGCTTTA ACCTGATCTG GGTTGTGGTG
AGTGGCATTG CCTCCCTGCT CTTTTTCCAG CACATGTTGA GCTAA
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| Protein sequence | MDHVHIQLDM TTFLLITIAM VVATFIIRFS VICMAGSFEM PERLKKTLRF VPVTVLPAII
AVEILGSGSN MEFNLHNPKV LAAIVCTLVS LRFNLIWVVV SGIASLLFFQ HMLS
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