| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2508 |
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| Symbol | |
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| ID | 5611079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3049752 |
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| End bp | 3050810 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933429 |
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| Product | peptidase T2, asparaginase 2 |
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| Protein accession | YP_001474245 |
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| Protein GI | 157375645 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1446] Asparaginase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.178704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.567192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAATA AATCGACTTT AGTAGCATTG ATCTTGGCGG CCGCAGCGTC TGTCACCACT
TCTGTATGGG CGGATGATAA GCCATTTTCG ATTGCTATCC ACGGCGGGGC CGGAACAATT
ACCAAGGCTA AGCTTACACC GCAGCAGCAA CAAGACTATC GCGATAAGCT CACCGAAGCG
GTCAATGCTG GATATAAGGT GCTTGAGAAA GGTGGCGATA GTGTGGTGGC TATTCAAGCG
GCGATCAATG TGATGGAAAA CAGCCCGCTG TTTAATGCCG GCGTCGGGGC CGTGTATACC
TATGATGGTG CCCATGAGAT GGATGCCTCA ATCATGGATG GCAAGACCAT GAATGCCGGT
GCGGTCTCAG GAGTTAAACA TATCAAGAAC CCCATTAATC TCGCCGATGC CGTGATGAAC
CGGTCGCCTC ATGTCATGTT ATCGGGTGCG GGCGCCGAAG AGTTTGCATT GACCCAAGGT
TTTACGCTGG TGCCGGCCAA CTCTTTCGAC ACAGAATCTC GTTATAAGCA GCTACAAGAT
GCCAAGGTGA AATTAAGAAA AGCCGAGTCG GAAAAGTCGC CCGATTATCA GGCGTCATTA
AACGGTGTTC CAGAGATAGA CTACCTGGAT CTGGATTATA AGTTCGGTAC CGTCGGCGCC
GTGGCTCTGG ATAAAAAAGG CAACCTAGCG GCCGGGACCT CTACAGGTGG CATGACGGCG
AAACGCTTCG GTCGAATCGG TGATTCTCCG GTCATCGGTG CGGGCACCTA CGCAGAAAAT
GGGGTGTGCG CGGTATCTGC GACCGGTCAT GGCGAGTACT TTATTCGTTA CCATGTAGCG
GGAGATATCT GTGCACGGGT AAAATACCAA CAAAAGTCGA TAATTCAGGC GGCAGATGAG
GTCATCAATC AACGTCTTAT CACTGCAGGT GGTACCGGCG GCGTGATTGC TATCGATCAG
CGCGGCAATA TCGCTACCCC ATTCAATACC GAAGGGATGT ACCGCGCCAC ACGTAAGAAT
GGTGAGCCAG CAGATGTGAT GATCTGGCGG GATATGTAA
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| Protein sequence | MKNKSTLVAL ILAAAASVTT SVWADDKPFS IAIHGGAGTI TKAKLTPQQQ QDYRDKLTEA
VNAGYKVLEK GGDSVVAIQA AINVMENSPL FNAGVGAVYT YDGAHEMDAS IMDGKTMNAG
AVSGVKHIKN PINLADAVMN RSPHVMLSGA GAEEFALTQG FTLVPANSFD TESRYKQLQD
AKVKLRKAES EKSPDYQASL NGVPEIDYLD LDYKFGTVGA VALDKKGNLA AGTSTGGMTA
KRFGRIGDSP VIGAGTYAEN GVCAVSATGH GEYFIRYHVA GDICARVKYQ QKSIIQAADE
VINQRLITAG GTGGVIAIDQ RGNIATPFNT EGMYRATRKN GEPADVMIWR DM
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