Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2486 |
Symbol | |
ID | 5610029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3024480 |
End bp | 3024764 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640933407 |
Product | YebG family protein |
Protein accession | YP_001474223 |
Protein GI | 157375623 |
COG category | [S] Function unknown |
COG ID | [COG3141] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000469742 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.320034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTA TTACTAAATT TGTTGTGGTC AGAGAAGGGG TTGAGAAGAT GACATTTACA TCTAAGAAGG AGGCGGATGC CTACGATAAG ATGCTTGATA TCGCGGATCA ACTCACTCCT TTCTTGACCG AGTCCGAGCT TGAGATAGAT GAAAATACTT GTGAAAAGTT AAGTTTCTAT CTGGCACAAC ATAAAGAGCA ACTAATGAGT TTATTGAAAG GTGTTGCGCC TAAAAAAGAA CCTTCGCCTA AAAAAACGGC TAATAAAGCC GAATCGAAAA AATAA
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Protein sequence | MAVITKFVVV REGVEKMTFT SKKEADAYDK MLDIADQLTP FLTESELEID ENTCEKLSFY LAQHKEQLMS LLKGVAPKKE PSPKKTANKA ESKK
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