| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2468 |
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| Symbol | |
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| ID | 5611422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2995337 |
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| End bp | 2995852 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933384 |
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| Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
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| Protein accession | YP_001474205 |
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| Protein GI | 157375605 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000001644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00979374 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAG CAAACAGTTT CAATAAAAAA GACCTAATAG CCTGCGGCCA TGGTCAGTTA
TTCGGTAAAA ACTCTCCACG TCTGCCTATA GACAACATGT TGATGATGGA TAGGATCACC
AAAATTAATG CAGATGGCGG TGAATTCGGT AAGGGCGAAA TTGTAGCAGA GCTTGATATT
AACCCTGACC TATGGTTTTT CGGCTGTCAC TTTTCAGGCG ATCCTGTAAT GCCTGGTTGT
CTGGGTTTAG ATGCATTATG GCAGCTAGTC GGTTTCTTCC TGGGCTGGGA AGGTGCTGAA
GGCAAAGGAC GCGCATTGGG CGTGGGTGAG GTTAAGTTTA CAGGCCAGGT ACTACCTGAT
GCTAAAAAAG TGACCTATAA GCTGACGATT AAACGTAAAG TATACCGAAA GTTGGTAATG
GGTATTGCCG ATGCGACGAT GGAAGTTGAC GGACGTGAGA TCTACAGTGC AAAAGATCTA
AAAGTGGGTA TATTCACCGA TACATCTTCA TTCTAA
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| Protein sequence | MSKANSFNKK DLIACGHGQL FGKNSPRLPI DNMLMMDRIT KINADGGEFG KGEIVAELDI
NPDLWFFGCH FSGDPVMPGC LGLDALWQLV GFFLGWEGAE GKGRALGVGE VKFTGQVLPD
AKKVTYKLTI KRKVYRKLVM GIADATMEVD GREIYSAKDL KVGIFTDTSS F
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