| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2447 |
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| Symbol | |
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| ID | 5609707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2970606 |
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| End bp | 2971892 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933358 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474184 |
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| Protein GI | 157375584 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2718] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.319583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0698328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGGG AGGTGCGCAT GGCGAATTTC ATAGATAGAC GACTCAATGC TAAGGGAAAA
AGCACGGTTA ATCGTCAACG GTTTATCAAC AGATACAAAC AGCAGATAAA AAAAGCTGTG
AGTGATGCTG TCACTCGACG CAGTGTTACC GATGTTGATA AGGGTGAAAA AATCGGGATC
CCGACGAAAG ACATTAGTGA ACCTTCCTTT CATCAAGGAC AAGGAGGAGT TAAGGAACGG
GTACATCCGG GCAATGACCA ATTTACCAGA GGAGATAAAA TCGAGCGACC ACCTTCTGGC
ACAGGACAAG GTTCCGGCCA GGGAGATGCG TCCGATTCTG GTGAAGGGCA AGATGATTTT
GTTTTCCAGA TCTCTAAGGA TGAGTACCTT GAGTTATTAT TTGAAGATCT CGAGTTACCC
AACTTACAAA ATAATCGTCT AAACAAATTG GTTGAATACC AAACCTATCG TGCAGGCTTT
ACCAATGATG GTGTGCCGGC AAATATCAAT ATTGTTCGTT CACTACGCTC ATCATTAGCA
CGCAGAATTG CAATGACCTC CTCGAAGAAG GCCCAACTTA GCCTGCTAGA GAAAGAGCTT
GAAGAGCTGG AAAATACACC TGGAGCAGAA GCGGAAAGAA TTCTACTCAT CAAGGAGCAG
ATAGAAGAGC TAAAGCAGAA GATAGACAGG GTTCCCTTTA TCGATACGTT TGATCTCAGG
TACAACAACT TCGCCAAACG CGAGATACCT TCGAGTCAGG CTGTCATGTT CTGTCTGATG
GATGTGTCCG GTTCAATGGA TCAGGCAACT AAGGATATGG CCAAGCGCTT TTATATTCTG
CTCTACCTTT TTCTAACCCG AACCTATAAG AATCTTGACG TTGTCTATAT ACGCCACCAC
ACCCAAGCTA AAGAGGTTGA TGAACACGAG TTTTTCTATT CACAGGAAAC AGGTGGCACT
ATTGTATCGA GTGCATTAAA ACTCATGCAT AAAATTCAAA AAGAGCGTTA TCCGGAAAGC
GAATGGAATA TCTATGCAGC ACAGGCATCT GATGGTGACA ATTGGGCTGA TGACTCCCCC
GGATGTAAAC AGATCCTTGA AAAAAACCTC CTTCCTGTGG TGAGATATTT TAGTTACATA
GAGATCACTA ACCGCGCCCA TCAAACACTC TGGCGGGAGT ATGAAAACCT CCAAAAGTCG
TTTGATAACA TCGCCGTCCA GCATATTAAA CAGGCGGAAG ATATATACCC GGTATTTAGA
GAACTATTTA AGAAGCAAGC AGTTTAA
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| Protein sequence | MTWEVRMANF IDRRLNAKGK STVNRQRFIN RYKQQIKKAV SDAVTRRSVT DVDKGEKIGI
PTKDISEPSF HQGQGGVKER VHPGNDQFTR GDKIERPPSG TGQGSGQGDA SDSGEGQDDF
VFQISKDEYL ELLFEDLELP NLQNNRLNKL VEYQTYRAGF TNDGVPANIN IVRSLRSSLA
RRIAMTSSKK AQLSLLEKEL EELENTPGAE AERILLIKEQ IEELKQKIDR VPFIDTFDLR
YNNFAKREIP SSQAVMFCLM DVSGSMDQAT KDMAKRFYIL LYLFLTRTYK NLDVVYIRHH
TQAKEVDEHE FFYSQETGGT IVSSALKLMH KIQKERYPES EWNIYAAQAS DGDNWADDSP
GCKQILEKNL LPVVRYFSYI EITNRAHQTL WREYENLQKS FDNIAVQHIK QAEDIYPVFR
ELFKKQAV
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