Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2436 |
Symbol | |
ID | 5609659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2958516 |
End bp | 2958746 |
Gene Length | 231 bp |
Protein Length | 76 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640933347 |
Product | SirA family protein |
Protein accession | YP_001474173 |
Protein GI | 157375573 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00512226 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATTA TGGTTTCTAT CGATTTAACG GCAATACGTT GTCCATTAGC TTTAGTGAAA GTAAAACTCG CATTAAAACA ACTTGAAGAT GGAGAGGTAC TTTGTGTCTC TTTATCTGAC ATTGGCTCTA GGCAGGATGT TCCCCGTTTT TTAAAAAAAG TCGGATATCG CTATTCTGAG GTATGTAATG ATGAGAATAT GCTGACAATA AAAATATCTA ATCTTCGTTA G
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Protein sequence | MNIMVSIDLT AIRCPLALVK VKLALKQLED GEVLCVSLSD IGSRQDVPRF LKKVGYRYSE VCNDENMLTI KISNLR
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